Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1321 ATGAGGAAGAGCATAGCGTGGGAAGATTTAACGGTGGAAGTGCCTTGTTTGGATGGCCTcaataagaataagaaaaagttGCTTCTTCATTCTCTCACTGCTTTTGCTTATTCTCATCGGATTATGGCTCTCTTGGGTCCTTCTGCCTCCGGCAAAACCACTCTTCTCAACTCTCTCGCTGGAACGCTTTCTGCGAATGTTACCGTCACTGGCAACATTTTGATCAATGGCAACAACAGAAACTTCTATTGCGGAGAGATGTCTTATGTCGCTCAAGAAGAGTATTTCTTGGGAACTTTGACTGTCAGAGAAACCCTAACTTACTCTGCGCAGATGAGGCTTGTTTCCAGAATGACACAACAAGAGATAAGCAAGGCGGTGCAAGACACAATCACGGAAATGGGGCTTCAAGAGTGTGCTGATAATCAGATTGGGAATTGGCATTTGCGAGGGATTAGTAATGGTGAAAAGAAGCGATTAAGCATTGGTCTTGAGATTTTGACACAACCTGATTTCTTATTTCTGGATGAACCCACCAGTGGGCTTGATAGTGCCTCCGCTTACTACGTTATCCGAGCCCTACGCAACATAGCCTGTGGTGGAAAAATAGTTATCTGTTCAATTCATCAGCCCAGTAGCGAAATTTTTCATCTATTTGATGATTTGCTCTTGCTCTCAGGTGGAGAAACTGTGTATTTCGGCGAAGCAAAGATGGCTTTAGAGTTTTTTGCTAATGCAGGGTTTCCATGTCCAACTAGAAGAAATCCTTCTGATCATTTTCTTCTATGCATTAATATGGACTTCGAATTTATATCAACATCGTCAAATTCACCAAAGGTCATGAAAAGATCAGAAATTAGAGAGACCCTTATTAGGAGTTACAAAAGTTCAGAACCAATGGTCAATGCGAGAAGGAGGATTCAACAACTGGAAGAACAAGTGATTGAGTCCTACACGAGAAGAGGCACTAGCAGTTGGTGGAAGCAACTATCCACATTAACCCAGCGATCTTTCCTGAACATGTTTAGGGACATTGGCTACTATTGGCTGAGGATCATATTTTATGTATTGGTATCAGTTAGTGCCGGATCCCTATTTTTTCATATTGGTACAGAAAACAACTCAATATTGGCTAGAGGGAAGTGTATATCATTCATCTATGGCTTCATGACTTGTTTGTCATGTGGAGGTTTACCATTTTTCATCGAAGAATTGAAGGTATTCTATGGTGAAAGGTCTAAAGGGCACTGTGGAGTGGCTGTATTTGTACTCTCAAACATCCTATCATCTTTTCCTTTCCTTGTTCTTATATCTCTCTTCTCGGGGACAATCATATACAACATGGTGCAGTTTCATTCGGGTTTAACCCATTTTGCATTTTTCTGCATCAATTTGTTCTGTTGCTTATCAGTTGTTGAGAGTTGCTTCATGGTTGTGGCATCAATGGTTCCCAACGTTCTTATGGGCATAGCAACGGGAACTGGTGTGAtaATCTTTATGATGATATCTTCTCCAATCTTCAGACCTCTACCTTACATTCCCAAGTTCTTTTGGCGTTACCCTATGTCCTACCTCAGTTTTGCTACTTGGGCAGTACAGGGTCATTACAAGAATGATATGGTGGGGCTTGAATTTGATCCTGTGGTACCTGGTGACTCAAGTGTGAAGGGAGAAGAAATCCTAAAGTTGGTATTTGGGGTTCCATTAGATCATGACAAGTGGTGGGACTTAACAGCATTGATCACCTTATTGTTACTTCATCGTTTGCTCCTTTTCTTTGTACTTGGATCCAAATCACAGTTGCTCTGCTTCTATGCCAAGGTATATCTACGTCACTTTGCTGCAAGATTTTCACCAACTTACAAACCAGCTTTCTCTTCCTAG 1884 0.4119 MRKSIAWEDLTVEVPCLDGLNKNKKKLLLHSLTAFAYSHRIMALLGPSASGKTTLLNSLAGTLSANVTVTGNILINGNNRNFYCGEMSYVAQEEYFLGTLTVRETLTYSAQMRLVSRMTQQEISKAVQDTITEMGLQECADNQIGNWHLRGISNGEKKRLSIGLEILTQPDFLFLDEPTSGLDSASAYYVIRALRNIACGGKIVICSIHQPSSEIFHLFDDLLLLSGGETVYFGEAKMALEFFANAGFPCPTRRNPSDHFLLCINMDFEFISTSSNSPKVMKRSEIRETLIRSYKSSEPMVNARRRIQQLEEQVIESYTRRGTSSWWKQLSTLTQRSFLNMFRDIGYYWLRIIFYVLVSVSAGSLFFHIGTENNSILARGKCISFIYGFMTCLSCGGLPFFIEELKVFYGERSKGHCGVAVFVLSNILSSFPFLVLISLFSGTIIYNMVQFHSGLTHFAFFCINLFCCLSVVESCFMVVASMVPNVLMGIATGTGVIIFMMISSPIFRPLPYIPKFFWRYPMSYLSFATWAVQGHYKNDMVGLEFDPVVPGDSSVKGEEILKLVFGVPLDHDKWWDLTALITLLLLHRLLLFFVLGSKSQLLCFYAKVYLRHFAARFSPTYKPAFSS 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1321 627 Gene3D - 1 246 IPR027417 -
Sto8g1321 627 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 5 611 - -
Sto8g1321 627 SMART AAA_5 38 229 IPR003593 -
Sto8g1321 627 Pfam ABC transporter 38 180 IPR003439 GO:0005524
Sto8g1321 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 611 - -
Sto8g1321 627 Pfam ABC-2 type transporter 329 534 IPR013525 GO:0016020|GO:0140359
Sto8g1321 627 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 5 252 IPR003439 GO:0005524
Sto8g1321 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 243 IPR027417 -
Sto8g1321 627 Pfam ABC-2 type transporter 209 309 IPR043926 GO:0140359
Sto8g1321 627 Coils Coil 300 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1321 Sto-Chr8 8382589 8388949 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1321 28 221 Calmodulin-binding Proteins AT2G36910 25.366 8.81e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1321 K05681 - gmx:100802207 867.07