Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1319 ATGGGAACTGCGAGGAGGCAGTTGAAGGCTATGCTTTGGAAGAACTGGCTTCTCAAGATTCGGCATCCATTTGTAACTAGTGCCGAGATTTTCCTCCCTACTCTAGTAATGTTGCTGTTAATAGCTGTAAGGACTCGGGTTGATACACAAATTCACCCAGCTCAACCGCACATTCGAGAAGAGATGTATGTGGAAGTGGGCAGTGGTATTTCCCCTAGCTTCCAACAAGTTTTGGAACTATTGTTGGCCAAGGGAGAGTATTTAGCTTTTGCCCCTGATACAAAAGAGACTGAGCAGATGATAGACATAATGTCAATAAAATTTCCCCTCTTGAAGCTTGTCAGTAGAGTATATAAAGATGAGTTAGAGCTTGAAACTTACATTCGCTCAAATGTTTATGGTACCTGCAATCAAGCAAGCAATTGTTCAAATCCCAAAATCAAAGGTGCTGTTGTGTTTCACGAACAAGGTCCTCAGTCATTTGATTATAGCATACGCCTCAATCATACTTGGGCTTTCTCTGGTTTTCCTGATGTTAAAGCCATAATGGATACAAATGGCCCTTTTCTCAATGACTTGGAACTTGGTGTCAGTGCTATACCAACAATGCAATACAGCTTCAGTGGGTTTTTGACGCTCCAGCAAGTAGTAGATTCATTCATAATATTCATTGCTCAGCAGTCTGACATCAATCCCAGCATTGAAAGTGGAGATCGTCCTCTGCCACGCTACAATTATACTGATTTTCATTTGAAAAGTCCATGGACTCAGTTTATCCCAACTCACATACGAATGGCTCCATTTCCCACTCGAGAGTACACCGATGACCAATTCCAGTCAATTGTAAAGAAATTCATGGGAGTGTTGTACTTAATGGGATTTCTCTATCCAATTTCTCGATTGATCAGTTATTCTGTGCTCGAGAAGGAACAGAAAATTAAGGAAGGACTCTACATGATGGGTCTTAAAGATGGTGTGTTCCATCTCTCTTGGTTTATAACATATGCCTTGCAGTTTGCAATTTCTTCGGGGATCATAACAGCTTGCACCATGGATAATTTATTCAAGTATAGTGATAAGACACTGGTGTTTGCATACTTCTTCCTTTTTGGGCTTAGTGCAATTATGCTGTCGTTTTTTATATCGACATTTTTCAAACGGGCCAAAACAGCTGTAGCAGTTGGAACCCTTTCATTTCTTGGTGCCTTTTTCCCTTATTACACTGTATATGAAGAGGGAGTCTCTATCATCTTGAAGATTATTGCTTCTTTGCTTTCACCAACGGCTTTTGCTCTAGGGTCTATCAACTTTGCCGATTATGAGCGTGCTCATGTTGGACTTCGTTGGAGCAACATATGGCGAGAATCATCTGGAGTGAATTTTTTGGTCTGTTTTCTGATGATGCTGTTTGATACACTGCTGTATTGTGCAATTGGTCTTTATCTTGATAAGGTTCTTCCAAGGGAGTACGGGTTGCAATATTCATGGAGctttattttccaaaaagaCTTTTGGAGGAAGAAAAAATCTATGAAACATTGTTCTTTAAATTCGGATATAAAAAATTCTGATAAGCATTCCAAGtcaaaaggaaaattttcagGGGAGAATACTTTCAGACCTGCTATAGAAGCAATAAGCTTGGACATGAAACAACAAGAGCTTGATGGAAGGTGCATTCAAATTAGgaatttgcataaagtttatgCTTCTAAAAAGGGGGATTGCTGTGCTGTAAACTCATTACGGCTTACATTGTATGAAAATCAGATTCTTGCTCTTTTAGGGCACAATGGAGCTGGAAAAAGCACGACAATCTCAATGCTTGTTGGCCTTCTTCCTCCTACTTCAGGGGATGCTTTGGTGTTGGGAAAGAATATTTTAACTGATATTGATGAAATACGGAAGGTTTTGGGTGTTTGCCCACAAAATGATATTCTCTTTCCGGAATTGACTGTGAGAGAGCATCTAGAAATATTTGCCATATTAAAGGGAGTAGAGGAAGACTCCTTAAAGGATGTTGTTACTAGTATGGTTGATGAGGTTGGTTTGGCTGATAAAATCAACACTGTTGTAAGATCTCTTTCTGGTGGCATGAAGAGGAAGCTGTCTCTTGGAATTGCATTGATAGGAAATAGTAAGGTTATAGTTCTTGATGAACCTACAAGTGGAATGGATCCATACTCAATGCGCTTGACTTGGcagctaataaaaaaaattaagaagggAAGGATAATATTACTAACAACACACTCTATGGATGAAGCTGATGAACTAGGTGATCGGATAGCTATCATGGCCAATGGTTCTTTGAAATGCTCTGGAAGTTCCCTTTTCCTGAAGCATCACTATGGTGTTGGTTATACACTAACTCTTGTGAAGTCAGCACCTACTGCTTCAGTTGCTTCTGATATTGTAAGACGCCATGTTCCATCAGCAACTTGTGTGAGTGAGGTGGGGACTGAGATTTCCTTCAGGCTTCCTCTGCTATCCTCACCAGCCTTTGAGAGTATGTTTAGGGAAATTGAAAGTTGCTTGAGGAAATCAGTTTCCAACTTGGAATCCACCGATAATGATGAAAAAGGCAGTCTTGGTATTGAAAGCTATGGTATATCTGTCACAACTCTGGAAGAGGTATTCCTGCGAGTTGCAGGATGTGACTATGATGAAGTTGAATGCTTTGAGGAGAAAAACTGCCCCCCTATATCAGACTCTTTGGCTTCTCATGCTTATTATGATCGTCCATCCTCAAAATcatttcattttgatttttttggaaattacaGGAAGATTCTTGGATTCATATCTAGCTTAGTGGGAAGAGCTTGTAGTTTATTTTTTGCTACAGTGACAAGTCTGATAAACCTCCTAGGCATGCTGTGTTGTAGCTGTTGTGTCTTCACCAGGTCAACATTTTGGCAACATTCTAAAGCTTTAATAATTAAGAGGGCAATATCCGCTCGCAGAGATCACAAAACTATTGTTTTCCAGCTCCTGATTCCTGCTGTCTTCTTGTTTATTGGTCTTCTATTTCTTAAGCTCAAGCCACATCCTGATCAGCAGTCTCTGACCCTTACAACATCTTATTTTAATCCTTTGTTGAGTGGAGGTGGTGGGGGAGGTCCAATTCCTTTTAATCTCTCTTTTCCAATTGCTGGAGAGGTAGCCCATTATGTTAAAGGAGGGTGGATTCAAAGGGTCAAACCAACTGCATACAAATTCCCTAACCAAGAAAAAGCATTAGCTGATGCAGTGGATGTAGCAGGGCCGACTCTTGGACCTGCTTTAATATCGATGAGTGAATATTTGATGTCCAGCTTTAATGAATCCTACCAATCTAGGTATGGAGCAATTTTATTGGATGAGCAGAATAATGATGGAAGCTTAGGATACACTGTTTTACATAACTGTTCTTGTCAACATTCTGGTCCAACTTTTATAAATTTGATGAATTCCGCAATTCTAAGACTTGCTACTCGTGACATGAATATGACAATTCAGACACGTAACCACCCTCTACCAATGACGCAAAGCCAGCGCTTACAACGTCATGATCTGGACGCCTTCTCTGCTGCAATTATTGTCAATATTGCCTTTTCTTTTATACCTGCCTCTTTTGCTGTTTCAATTGTAAAGGAACGTGAAGTTAAAGCTAAACACCAACAATTAATCAGCGGGgtttctatcCTTTCATATTGGGCTTCTATATTTATCTGGGACTTCGTGAGCTTCTTGTTTCCTACCTCCTTTGCAGTAGTTCTCTTTTACATCTTTGGTCTGGATCAGTTTGTTGGAGGGCCTTCTTTGCTACCAACAATCCTCATGTTTTTGGAGTATGGACTTGCAATTGCATCATCAACATATTGTCTTACGTTTTTCTTTTCTGACCATACTATGGCTCAGAATGTGGTTCTCCTTGTCCACTTTTTCACTGGATTAATATTAATGGTTATTTCATTCATTATGGGACTGATACCATCAACAATGAGTGCGAATTCTTTTCTTAAGAACTTTTTCAGAATATCTCCTGGATTTTGTTTTGCTGATGGACTTGCTTCGTTAGCTCTTCTGCGTCAAGGAATGAAAGATAAGACAAGTGATGCCGTGTTTGATTGGAATGTTAGTGGTGCCTCCATTTGTTATCTTGCTGTTGAGAGCTTTAGTTACTTTCTGTTAACGCTCATGATTGAAGCTTTTCCTTCTCTCAAATTGACGCCATTCATGATAAAAAGATGGTGGGGAAATATTATCCCACGTAATACTCCTTCTTATCTGGAAAATCTATTAGAATCTTCCTCAGAAACTGGTGGTTTGGACCTTGTCGAAGATGTAGATGTTAAAACGGAAAGAAACAGAGTACTTTCAGGTTCCCTTGACAATGCCATCATCTACTTGTGTAATCTTCGTAAGGTATATCCTGAAGGAAAGCATCATGGGCAAAAAGTTGCAGTAGATTCATTAACCTTCTCAGTTCAGGAAGGAGAATGTTTTGGCTTTTTGGGGACGAATGGAGCTGGAAAGACAACAACTTTGTTTATGCTGTGTGGGGAGGAATCACCTTCTGATGGGACTGCTTGTATTTTTGGAAAAGATATACGCTCCCATCCCAAGGCTGCTCGTCAGCATATTGGATATTGTCCACAATTCGATGCTCTGTTGGAATATTTAACAGTTCAAGAGCATCTTGAGCTTTATGCTAGAATAAAAGGTGTTCCAAATTACATGATTGATAATGTTGTTATGGAAAAGTTGGAGGAGTTTGACTTGTTGAAGCATGCAAATAAGCCATCATTTTCTCTTAGCGGAGGAAATAAAAGGAAACTGTCTGTTGCGATTGCAATGATTGGAGATCCTCCTATAGTCATTCTTGATGAGCCATCCACAGGTATGGATCCCATTGCCAAACGATTCATGTGGGATGTAATATCTAGGATTTCTACAAGACGAGGAAAGACTGCAGTAATTCTTACTACCCACAGCATGAATGAAGCTCAAGCATTGTGCACCCGAATAGGGATAATGGTTGGTGGCCGATTAAGATGCATTGGAAGTCCACAGCATCTGAAAACAAGATTTGGGAATCACCTAGAACTAGAGGTGAAACCTACTGAAGTGAGCTCTGTGGACATGGAAATACTCTGCAAAGCTATTCAAGAAAGACACTTTGATATTCCCTCTCATCCTAGAAGTTTACTTGATGACCTCGAAATTTGCATTGGAGGTGCTGACTCCATTTCATCAGAAAATGCCTCCATTGCAGAAATTAGCTTGTCACGAGAAATGATTGTCTTAATTGGACGCTGGCTTGGCAATGAAGAAAGAACAAAAGTACTTATCTGTACACCTGTCTGTGATGGTGGTTTTAGTGAACAGTTATCAGAACAATTGTTTCGAGACGGTATGTATGAACATTCAATAGAAGGCTCTTCTTCTTACTGTTGGTATAGCACTCTAGAAGAAATATTTGTGCCTGCTCCTTTCAATTGTGGTGGTATTCCATTGCCGGTATTTTCTGAGTGGTGGTTATCGAAAGAAAAGTTTTCGGCAATAGATGCATTTATTCTATCTTCCTTTCCTGGAGCAAGATTCCAAGGATGTAATGGATTGAGCATCAGATACCAGCTACCCTACGGTCAAGACTTTTCTCTTGCGGATGTTTTTGGACTAATTGAAGGAAACAGAAATAGACTGGGCGTTGCGGAGTACAGCATCAGCCAGTCAACTCTAGAGACCATATTTAACCATTTTGCAGCTGCTAATTCATGA 5766 0.3935 MGTARRQLKAMLWKNWLLKIRHPFVTSAEIFLPTLVMLLLIAVRTRVDTQIHPAQPHIREEMYVEVGSGISPSFQQVLELLLAKGEYLAFAPDTKETEQMIDIMSIKFPLLKLVSRVYKDELELETYIRSNVYGTCNQASNCSNPKIKGAVVFHEQGPQSFDYSIRLNHTWAFSGFPDVKAIMDTNGPFLNDLELGVSAIPTMQYSFSGFLTLQQVVDSFIIFIAQQSDINPSIESGDRPLPRYNYTDFHLKSPWTQFIPTHIRMAPFPTREYTDDQFQSIVKKFMGVLYLMGFLYPISRLISYSVLEKEQKIKEGLYMMGLKDGVFHLSWFITYALQFAISSGIITACTMDNLFKYSDKTLVFAYFFLFGLSAIMLSFFISTFFKRAKTAVAVGTLSFLGAFFPYYTVYEEGVSIILKIIASLLSPTAFALGSINFADYERAHVGLRWSNIWRESSGVNFLVCFLMMLFDTLLYCAIGLYLDKVLPREYGLQYSWSFIFQKDFWRKKKSMKHCSLNSDIKNSDKHSKSKGKFSGENTFRPAIEAISLDMKQQELDGRCIQIRNLHKVYASKKGDCCAVNSLRLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVLGKNILTDIDEIRKVLGVCPQNDILFPELTVREHLEIFAILKGVEEDSLKDVVTSMVDEVGLADKINTVVRSLSGGMKRKLSLGIALIGNSKVIVLDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCSGSSLFLKHHYGVGYTLTLVKSAPTASVASDIVRRHVPSATCVSEVGTEISFRLPLLSSPAFESMFREIESCLRKSVSNLESTDNDEKGSLGIESYGISVTTLEEVFLRVAGCDYDEVECFEEKNCPPISDSLASHAYYDRPSSKSFHFDFFGNYRKILGFISSLVGRACSLFFATVTSLINLLGMLCCSCCVFTRSTFWQHSKALIIKRAISARRDHKTIVFQLLIPAVFLFIGLLFLKLKPHPDQQSLTLTTSYFNPLLSGGGGGGPIPFNLSFPIAGEVAHYVKGGWIQRVKPTAYKFPNQEKALADAVDVAGPTLGPALISMSEYLMSSFNESYQSRYGAILLDEQNNDGSLGYTVLHNCSCQHSGPTFINLMNSAILRLATRDMNMTIQTRNHPLPMTQSQRLQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKHQQLISGVSILSYWASIFIWDFVSFLFPTSFAVVLFYIFGLDQFVGGPSLLPTILMFLEYGLAIASSTYCLTFFFSDHTMAQNVVLLVHFFTGLILMVISFIMGLIPSTMSANSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSDAVFDWNVSGASICYLAVESFSYFLLTLMIEAFPSLKLTPFMIKRWWGNIIPRNTPSYLENLLESSSETGGLDLVEDVDVKTERNRVLSGSLDNAIIYLCNLRKVYPEGKHHGQKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLFMLCGEESPSDGTACIFGKDIRSHPKAARQHIGYCPQFDALLEYLTVQEHLELYARIKGVPNYMIDNVVMEKLEEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPTEVSSVDMEILCKAIQERHFDIPSHPRSLLDDLEICIGGADSISSENASIAEISLSREMIVLIGRWLGNEERTKVLICTPVCDGGFSEQLSEQLFRDGMYEHSIEGSSSYCWYSTLEEIFVPAPFNCGGIPLPVFSEWWLSKEKFSAIDAFILSSFPGARFQGCNGLSIRYQLPYGQDFSLADVFGLIEGNRNRLGVAEYSISQSTLETIFNHFAAANS 1921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1319 1921 ProSitePatterns ABC transporters family signature. 695 709 IPR017871 GO:0005524
Sto8g1319 1921 CDD ABC_subfamily_A 1463 1689 - -
Sto8g1319 1921 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 1318 IPR026082 GO:0016021|GO:0055085|GO:0140359
Sto8g1319 1921 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1315 1659 IPR026082 GO:0016021|GO:0055085|GO:0140359
Sto8g1319 1921 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1653 1917 IPR026082 GO:0016021|GO:0055085|GO:0140359
Sto8g1319 1921 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 560 793 IPR003439 GO:0005524
Sto8g1319 1921 Pfam ABC-2 family transporter protein 992 1394 - -
Sto8g1319 1921 Pfam ABC-2 family transporter protein 234 479 - -
Sto8g1319 1921 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1463 1701 IPR003439 GO:0005524
Sto8g1319 1921 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 6 1318 - -
Sto8g1319 1921 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 1653 1917 - -
Sto8g1319 1921 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 1315 1659 - -
Sto8g1319 1921 CDD ABC_subfamily_A 560 781 - -
Sto8g1319 1921 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1462 1692 IPR027417 -
Sto8g1319 1921 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 560 779 IPR027417 -
Sto8g1319 1921 SMART AAA_5 588 770 IPR003593 -
Sto8g1319 1921 SMART AAA_5 1493 1680 IPR003593 -
Sto8g1319 1921 Pfam ABC transporter 1485 1627 IPR003439 GO:0005524
Sto8g1319 1921 Pfam ABC transporter 580 723 IPR003439 GO:0005524
Sto8g1319 1921 Gene3D - 547 796 IPR027417 -
Sto8g1319 1921 Gene3D - 1457 1705 IPR027417 -
Sto8g1319 1921 ProSitePatterns ABC transporters family signature. 1600 1614 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1319 Sto-Chr8 8353787 8374719 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1319 560 826 Calmodulin-binding Proteins AT2G36910 25.714 1.18e-16 84.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1319 8 8353787 8374719 Sto8g1319 8 8353787 8374719 ECH