Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1299 ATGGGTAATTGTTGTGTAACTCCGTCACCGTCGAGCCCTCGTGAGACCACgaagaaggggaagaagaagaaggaaaaccCATACGCGGGTGACGACGTAAACTACCATGCCAACGGTGGTGGGAGCAAGCTCTGCGTCTTGAAGGACCCGACGGGACGCGAAATCGAGCTAAGATACGAGCTGGGTCGCGAGCTCGGAAGGGGAGAATTCGGAATAACATACCTATGCACCGATAGAGAGACGGGTGAAGTTTTAGCTTGCAAATCGATATCGAAGAAGAAGCTCAGAACAGCTATTGATATCGAGGACGTGAGGAGAGAGGTTGAGATCATGAAACATTTGCCAAAGCACCCTAATATCGTGACCTTGAAGGACACCTATGAGGACGACAATGCGGTCCATCTTGTGATGGAATTGTGCGAAGGAGGAGAATTATTCGATCGGATCGTTGCGCGTGGGCACTACACAGAACGCGCCGCCGCAGCCGTCACACGGACGATTGTCGAAGTTGTGCAGATGTGCCACAAACATGGTGTGATGCATCGGGATCTCAAACCTGAGAACTTTTTGTTTGGAAACAAGAAGGAAACAGCACCTCTTAAGGCTATTGATTTTGGACTGTCAGTTTTCTTTAAACCTGGtgaaaaatttaatgaaatagtGGGAAGTCCATATTACATGGCGCCTGAGGTACTAAAACGAAATTATGGTCCAGAAGTAGATATATGGAGTGCTGGAGTAATTCTTTACATCTTGCTTTGTGGTGTCCCACCGTTTTGGGCAGAAACTGAACAGGGAGTTGCACAAGCCATCATACGCTCTGTTATTGATTTTAAAAGGGACCCATGGCCAAAAGTATCTGATAATGCAAAAGACCTTGTGAGGAAGATGCTTGACCCTGATCCAAAGCGGCGGCTTTCTGCACAGGAAGTGTTAGATCATCCATGGCTACAGAATGCAAAGAAAGCTCCTAATGTTTCTTTAGGAGAAACTGTCAAGGCAAGGCTCAAGCAATTCTCTGTAATGAACAAGCTTAAGAAAAGAGCTTTGAGGGTGATTGCAGAGCATTTGTCAGTAGAAGAAGTTGCTGGAATAAAGGAGGGATTCCAGCTGATGGATACTGGCAATAAAGGCAAGATTAACATTGATGAGCTACGAGTAGGGTTGCATAAACTAGGCCATCAAATCTCTGACGCTGACGTTCAAATTCTGATGGAAGCAGGTGATACAGATAAAGATGGATACCTGAATTATGGAGAATTTGTAGCTATTTCTGTTCATCTGAGAAAGATGGGCAATGATGATCATCTTCGAAAAGCCTTCCAATTTTTCGATCAAAACAAGAGTGGGTATATAGAGATTGAGGAGCTACGTGATGCCTTATCTGATGAAATTGATACAAACAATGAAGAAGTCATTAATGCAATTATTCATGACGTGGACACAGATAAGGATGGAAGAATAAGTTATGAGGAATTTGCAGCAATGATGAAGGCAGGGACAGATTGGAGGAAGGCATCAAGGCAGTATTCACGAGAGAGATTTACAAGTCTGAGTCTAAAATTGAtgaaggacggatccttgcaAGAGGCTTCGTTAGGGAAAGGAGTGAATGGAGGAATGGTCAAGTTGTGA 1635 0.4275 MGNCCVTPSPSSPRETTKKGKKKKENPYAGDDVNYHANGGGSKLCVLKDPTGREIELRYELGRELGRGEFGITYLCTDRETGEVLACKSISKKKLRTAIDIEDVRREVEIMKHLPKHPNIVTLKDTYEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQMCHKHGVMHRDLKPENFLFGNKKETAPLKAIDFGLSVFFKPGEKFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSDNAKDLVRKMLDPDPKRRLSAQEVLDHPWLQNAKKAPNVSLGETVKARLKQFSVMNKLKKRALRVIAEHLSVEEVAGIKEGFQLMDTGNKGKINIDELRVGLHKLGHQISDADVQILMEAGDTDKDGYLNYGEFVAISVHLRKMGNDDHLRKAFQFFDQNKSGYIEIEELRDALSDEIDTNNEEVINAIIHDVDTDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFTSLSLKLMKDGSLQEASLGKGVNGGMVKL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1299 544 Pfam Protein kinase domain 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1299 544 ProSiteProfiles Protein kinase domain profile. 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1299 544 Pfam EF-hand domain pair 435 498 IPR002048 GO:0005509
Sto8g1299 544 Gene3D - 326 500 - -
Sto8g1299 544 SMART serkin_6 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1299 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Sto8g1299 544 MobiDBLite consensus disorder prediction 15 30 - -
Sto8g1299 544 Coils Coil 451 471 - -
Sto8g1299 544 MobiDBLite consensus disorder prediction 1 35 - -
Sto8g1299 544 SMART efh_1 436 464 IPR002048 GO:0005509
Sto8g1299 544 SMART efh_1 364 392 IPR002048 GO:0005509
Sto8g1299 544 SMART efh_1 472 500 IPR002048 GO:0005509
Sto8g1299 544 SMART efh_1 400 428 IPR002048 GO:0005509
Sto8g1299 544 ProSiteProfiles EF-hand calcium-binding domain profile. 432 467 IPR002048 GO:0005509
Sto8g1299 544 SUPERFAMILY Protein kinase-like (PK-like) 58 325 IPR011009 -
Sto8g1299 544 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Sto8g1299 544 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Sto8g1299 544 ProSitePatterns EF-hand calcium-binding domain. 445 457 IPR018247 -
Sto8g1299 544 CDD STKc_CAMK 58 316 - -
Sto8g1299 544 SUPERFAMILY EF-hand 346 523 IPR011992 -
Sto8g1299 544 Gene3D Phosphorylase Kinase; domain 1 61 144 - -
Sto8g1299 544 ProSitePatterns EF-hand calcium-binding domain. 481 493 IPR018247 -
Sto8g1299 544 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 514 - -
Sto8g1299 544 ProSiteProfiles EF-hand calcium-binding domain profile. 360 395 IPR002048 GO:0005509
Sto8g1299 544 Pfam EF-hand domain pair 377 426 IPR002048 GO:0005509
Sto8g1299 544 CDD EFh 436 498 IPR002048 GO:0005509
Sto8g1299 544 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 14 514 - -
Sto8g1299 544 Gene3D Transferase(Phosphotransferase) domain 1 145 325 - -
Sto8g1299 544 ProSiteProfiles EF-hand calcium-binding domain profile. 396 431 IPR002048 GO:0005509
Sto8g1299 544 ProSiteProfiles EF-hand calcium-binding domain profile. 468 503 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1299 Sto-Chr8 8207794 8212052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1299 1 529 EF-hand Containing Proteins AT5G19450 80.414 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto8g1299 Pkinase 2.2e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1299 K13412 - cpap:110811275 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1299 8 8207794 8212052 Sto13g2860 13 33902823 33907451 CCT
Sto8g1299 8 8207794 8212052 Sto8g1299 8 8207794 8212052 ECH