Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1298 ATGGAAATGGCACTCAATCTTCGCGCcacttccttctccttttctgTCTCTAATCCTCGAAGGACCTCTTCTTCTCCTCAGTTTGTTAACCAACTCTTTGGCCTTCCGTTTTCTTCCTCGGGCCCTTCCAGACTGCCTCTGCAATTTGTTTCTCGGAATCCTACTTGCAGGCCCATCAAGTGCTCCGTTTCTGAAGTCACAGAACCTAAAACTGGTGAGAACAAGAGACAGTTGATGAGAAGAAGAGACATAAGGAACATAGCAATTGTAGCTCATGTTGATCATGGAAAAACAACTTTAGTTGATGCGATGCTGAAACAAACAAAGGTATTTCGTGATAATCAATTTGTGCAGGAAAGAATAATGGACTCAAATGATTTGGAGCGTGAAAGAGGAATCACAATACTAAGTAAAAATACATCTGTCACCTATAAAGACACcaagattaatattattgatacTCCTGGTCACTCTGACTTCGGAGGTGAAGTGGAGCGCATCCTAAACATGGTGGAAGGAATCCTTTTAGTGGTAGACTCTGTCGAAGGCCCAATGCCGCAGACAAGATTTGTTTTAAAGAAGGCTCTAGAGTTTGGTCATGcagttgttgttgttgtcaaTAAAATAGATAGACCTTCTGCTCGTCCAGACTTTGTCATAAATTCCACTTTCGAACTCTTTCTTGAACTAAATGCAACAGATGAACAGTGTGACTTCCAAGTAATATATGCAAGTGGCATAAAAGGACAGGCAGGACTGTCTCCTGAAAATTTGGCCGAAGATCTTGGGCCCTTGTTTGAGACCATAATCAGATGTATCCCTGGACCGCATATTGACAAAGATGGTGCACTGCAAATGCTTGCTACAAATATTGAATATGATGAACATAAAGGGCGTATAGCAATTGGGCGCTTGCAAGCTGGAGTTTTACAAAAAGGCATGGACGTCAAGGTATGTACTACAGAAGATTCATGTAGATACGGAAGAGTTAGTGAGCTTTTTGTGTACGACAAATTCAGTAGGGTCCCTGCAGAAAGTGTGGAGGCTGGAGATATATGTGCTGTATGTGGAATTGCTGATATTCAGATTGGGGAGACAATTGCTGACAAGGTATCTGGAAAGCCACTGCCATCCATCAAGGTGGAAGAACCAACAGTGAAAATGTCTTTCTCCATAAACACTTCGCCATTTGTTGGACGTGAGGGAAAGTATGTTACTAGTAGGAATTTAAGGGATAGGCTCTCTCGTGAACTGGAGCGAAATTTGGCCATGAGAGTTGAAGATGGTGAAACAGCAGATACATTTATTGTCAGTGGCCGTGGTACTTTGCATATAACCATACTCATAGAAAATATGCGAAGAGAAGGATATGAATTCATGGTAGGACCTCCCAAAGTAATCAACAAGAAAGTGAATGACCAAGTGCTGGAACCATACGAGATTGCCACTGTGGAGGTACCAGAAGAACATATGGGCGCTGTTGTTGAACTTCTGGGCAAGAGACGAGGGCAAATGTTTGATATGGAAGGAGTTGGATCGGAAGGAACCACACTACTCAAATATAAGATCCCAACCCGTGGCCTTCTTGGATTGCGGAATTCTATTTTAACTGCGTCCCGTGGAACAGCAATTCTTAACACTATTTTTGATAGCTATGGTCCTTGGGCTGGAGAGATTAGTACACGGGATCAAGGCTCACTGGTTGCTTTTGAGGATGGAACAAGTACTTCGTATGCACTCGCTAGTTCACAGGAGAGAGGTCAAATGTTTATTGGTCCTGGAGTGGACGTCTACAAAGGTCAAATTGTTGGCATCCATCAGCGACCTGGGGATTTGGCCTTAAACGTTTGCAAGAAAAAAGCCGCAACAAACATTCGTTCCAACAAGGAACAAACAGTGATTCTTGATACACCGTTGGATTATAGTCTGGATGACTGCATTGAATACATCCAAGAAGATGAGCTAGTTGAGGTTACTCCCCAGAGCATCCGAATGTGCAAGAATCCAAAACTGACAAAGAAAGCAAGGTAA 2031 0.4175 MEMALNLRATSFSFSVSNPRRTSSSPQFVNQLFGLPFSSSGPSRLPLQFVSRNPTCRPIKCSVSEVTEPKTGENKRQLMRRRDIRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVTYKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDFVINSTFELFLELNATDEQCDFQVIYASGIKGQAGLSPENLAEDLGPLFETIIRCIPGPHIDKDGALQMLATNIEYDEHKGRIAIGRLQAGVLQKGMDVKVCTTEDSCRYGRVSELFVYDKFSRVPAESVEAGDICAVCGIADIQIGETIADKVSGKPLPSIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLSRELERNLAMRVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVNDQVLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTLLKYKIPTRGLLGLRNSILTASRGTAILNTIFDSYGPWAGEISTRDQGSLVAFEDGTSTSYALASSQERGQMFIGPGVDVYKGQIVGIHQRPGDLALNVCKKKAATNIRSNKEQTVILDTPLDYSLDDCIEYIQEDELVEVTPQSIRMCKNPKLTKKAR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1298 676 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 82 277 IPR000795 GO:0003924|GO:0005525
Sto8g1298 676 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 84 672 IPR006298 GO:0005525
Sto8g1298 676 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 123 138 IPR031157 -
Sto8g1298 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 285 IPR027417 -
Sto8g1298 676 Gene3D bipa protein 562 641 IPR042116 -
Sto8g1298 676 SMART EFG_C_a 474 563 IPR000640 -
Sto8g1298 676 Pfam Elongation factor G C-terminus 475 560 IPR000640 -
Sto8g1298 676 Gene3D Elongation Factor G (Translational Gtpase), domain 3 385 668 - -
Sto8g1298 676 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 69 676 - -
Sto8g1298 676 SUPERFAMILY Translation proteins 230 377 IPR009000 -
Sto8g1298 676 Pfam Elongation factor Tu GTP binding domain 83 274 IPR000795 GO:0003924|GO:0005525
Sto8g1298 676 SUPERFAMILY EF-G C-terminal domain-like 382 466 IPR035647 -
Sto8g1298 676 TIGRFAM small_GTP: small GTP-binding protein domain 84 217 IPR005225 GO:0005525
Sto8g1298 676 CDD BipA_III 384 462 - -
Sto8g1298 676 Gene3D - 81 277 IPR027417 -
Sto8g1298 676 CDD TypA_BipA 83 276 - -
Sto8g1298 676 PRINTS GTP-binding elongation factor signature 86 99 IPR000795 GO:0003924|GO:0005525
Sto8g1298 676 PRINTS GTP-binding elongation factor signature 130 138 IPR000795 GO:0003924|GO:0005525
Sto8g1298 676 PRINTS GTP-binding elongation factor signature 150 160 IPR000795 GO:0003924|GO:0005525
Sto8g1298 676 PRINTS GTP-binding elongation factor signature 202 211 IPR000795 GO:0003924|GO:0005525
Sto8g1298 676 CDD BipA_TypA_II 284 377 - -
Sto8g1298 676 Gene3D - 468 561 - -
Sto8g1298 676 SUPERFAMILY EF-G C-terminal domain-like 477 592 IPR035647 -
Sto8g1298 676 CDD BipA_TypA_C 477 556 IPR035651 -
Sto8g1298 676 Pfam Elongation factor Tu domain 2 298 367 IPR004161 GO:0005525
Sto8g1298 676 PANTHER BNAC09G43450D PROTEIN 69 676 - -
Sto8g1298 676 Gene3D Translation factors 278 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1298 Sto-Chr8 8192037 8198380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1298 82 211 Eukaryotic Initiation Factors Gene Family AT3G22980 43.939 2.53e-24 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1298 K06207 - gmx:100785222 1185.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1298 8 8192037 8198380 Sto8g1298 8 8192037 8198380 ECH