Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1282 ATGAGCACCACTAATAATActagtagtaataataataataaggagtACTGCTACTACTCATCGCCCCCTAATTCCCCTCCTCTGAGAGAAGCCCTTCCTCTTCTGAGGCTGAGCCCTTCCTCTTCCTCGAAGCGCCACAAGAAGCAAGAGAGGATGATCccgaaggaggaggaagaggaagaggaagaagaagaagaagaagaggaagatgaagaggaggaggaagaagatgagacCAGTGTTACTGTTGCACTCCACATAGGATTGCCCAGCCCTAGTGCTGCTCAGATGCCGTCTCTCCTCATCTCTTCCTCTTCTAATTCTACTACTACTACTTGtcttcataataataataataataattgttggTCTGATGTGGCAACTACTACTACGGGTAATAAAGATGAGGAATTAGGAGATGGAGATGAAGAGCATGAGCTTCTGGATTCATCGTCTGGTGGGTTGTTGCTCCACCAGAGGCTGAACAAAGGCCAGTACTGGATCCCTACCCCTTCCCAGATTCTCATTGGTCCTACCCAGTTCTCTTGCCCTGTTTGCTACAAAACATTCAACCGCTATAACAACATGCAGatgcaCATGTGGGGGCACGGGTCGCAGTACAGAAAAGGGCCAGAGTCGCTACGAGGAACACAACCAACGGGGATGCTAAGGCTTCCATGCTACTGCTGTGCAGCTGGGTGCAGAAACAACATAGACCACCCGCGAGCCAAGCCCCTGAAGGACTTCCGCACCCTGCAGACCCATTACAAGAGGAAGCATGGCATCAAGCCCTTCATGTGCAGAAAATGTGGGAAGGCCTTCGCTGTCAGAGGCGATTGGAGAACCCACGAGAAGAACTGCGGCAAGCTCTGGTACTGTATCTGTGGCTCTGATTTCAAGCACAAGAGATCCCTCAAGGATCACATCAAGGCCTTTGGGGCTGGCCATGCACCTTATGCTATCCATGCCTTTCAAGAAGAAGATGACCACGACCCAGACCCAGCTTCTGAAGTTGAGCAAGATAATGACTCCACCACCCACTAA 1044 0.4435 MSTTNNTSSNNNNKEYCYYSSPPNSPPLREALPLLRLSPSSSSKRHKKQERMIPKEEEEEEEEEEEEEEDEEEEEEDETSVTVALHIGLPSPSAAQMPSLLISSSSNSTTTTCLHNNNNNNCWSDVATTTTGNKDEELGDGDEEHELLDSSSGGLLLHQRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAAGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGAGHAPYAIHAFQEEDDHDPDPASEVEQDNDSTTH 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1282 347 Coils Coil 46 79 - -
Sto8g1282 347 PANTHER ZINC FINGER PROTEIN WIP2 6 342 - -
Sto8g1282 347 ProSitePatterns Zinc finger C2H2 type domain signature. 183 203 IPR013087 -
Sto8g1282 347 ProSiteProfiles Zinc finger C2H2 type domain profile. 265 285 IPR013087 -
Sto8g1282 347 MobiDBLite consensus disorder prediction 1 20 - -
Sto8g1282 347 SMART c2h2final6 265 285 IPR013087 -
Sto8g1282 347 SMART c2h2final6 181 203 IPR013087 -
Sto8g1282 347 MobiDBLite consensus disorder prediction 326 347 - -
Sto8g1282 347 SUPERFAMILY beta-beta-alpha zinc fingers 247 285 IPR036236 -
Sto8g1282 347 MobiDBLite consensus disorder prediction 1 82 - -
Sto8g1282 347 ProSiteProfiles Zinc finger C2H2 type domain profile. 181 208 IPR013087 -
Sto8g1282 347 MobiDBLite consensus disorder prediction 56 79 - -
Sto8g1282 347 Gene3D Classic Zinc Finger 180 203 - -
Sto8g1282 347 PANTHER ZINC FINGER PROTEIN WIP2 6 342 IPR043584 GO:0003700|GO:0010468
Sto8g1282 347 Gene3D Classic Zinc Finger 242 316 - -
Sto8g1282 347 SUPERFAMILY beta-beta-alpha zinc fingers 177 203 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1282 Sto-Chr8 8039469 8041036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1282 28 343 C2H2 Transcription Factor Family AT3G57670 67.500 1.03e-140 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto8g1282 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1282 - - zju:107403750 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1282 8 8039469 8041036 Sto13g2874 13 34004881 34006435 CCT
Sto8g1282 8 8039469 8041036 Sto8g1282 8 8039469 8041036 ECH
Sto8g1282 8 8039469 8041036 Sto12g0099 12 666381 668289 ECH