Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1276 ATGGAGACCGATAATAGTGAGAGCAAGTCAAAGATGGAAGACTATGAGGTTATAGAGCAAATTGGCAGAGGAGCATTCGGCGCCGCCTTTCTCGTTCTCCATAAGTCCGAGAATAAGAAGTATGTGCTGAAGAAGATTCGCTTGGCCAAGCAAACCGAGAAGTTTAGACGTACAGCGCACCAAGAGATGAACCTGATAGCGAAACTAAATAACCCATACATTCTGGAGTACAAAGATGCGTGGGTAGAAAAGGAGGACTACTTATACGTTGTAACTGGTTATTGCGTAGGAGGTGACATGGCTGGGATGATAAAGAGGGCCCGAGGTTCCTTTTTTTCTGAGGAGAAGATCTGCAAATGGCTGACTCAAATATTGCTTGCTGTGGACTACCTGCATTCTAATCGTGTACTCCACAGGGATCTTAAGtGTTCCAACATATTTCTTACCAAAGACAATGACATCCGGCTTGGTGACTTTGGTCTTGCAAAGCTTCTTAACACAGAAGACCTTGCTTCCTCGGTTGTTGGAACTCCAAACTACATGTGTCCTGAGCTCCTTGCAGATATACCTTATGGTTATAAATCTGACATATGGTCACTTGGTTGTTGCATGTTTGAAATTGCTGCACATCAACCGGCATTTCGTGCTCCAGACATGGCTGGACTTATCAATAAGATAAATAGATCCTCCATTTCTCCACTGCCAATTGTCTATTCTTCCACACTGTAA 729 0.4362 METDNSESKSKMEDYEVIEQIGRGAFGAAFLVLHKSENKKYVLKKIRLAKQTEKFRRTAHQEMNLIAKLNNPYILEYKDAWVEKEDYLYVVTGYCVGGDMAGMIKRARGSFFSEEKICKWLTQILLAVDYLHSNRVLHRDLKCSNIFLTKDNDIRLGDFGLAKLLNTEDLASSVVGTPNYMCPELLADIPYGYKSDIWSLGCCMFEIAAHQPAFRAPDMAGLINKINRSSISPLPIVYSSTL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1276 242 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Sto8g1276 242 PIRSF ILK 1 230 - -
Sto8g1276 242 Coils Coil 242 242 - -
Sto8g1276 242 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 9 242 - -
Sto8g1276 242 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Sto8g1276 242 Gene3D Transferase(Phosphotransferase) domain 1 95 242 - -
Sto8g1276 242 CDD STKc_Nek 14 242 - -
Sto8g1276 242 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 9 242 - -
Sto8g1276 242 SUPERFAMILY Protein kinase-like (PK-like) 9 229 IPR011009 -
Sto8g1276 242 SMART serkin_6 15 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1276 242 Pfam Protein kinase domain 15 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1276 242 ProSiteProfiles Protein kinase domain profile. 15 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1276 242 Gene3D Phosphorylase Kinase; domain 1 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1276 Sto-Chr8 8012183 8015185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1276 6 228 AGC Kinase Gene Family AT5G62310 29.615 1.07e-32 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Sto8g1276 Pkinase 1.3e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1276 K08857 - zju:107403753 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1276 8 8012183 8015185 Sto13g2876 13 34018332 34022753 CCT
Sto8g1276 8 8012183 8015185 Sto8g1276 8 8012183 8015185 ECH