Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1275 ATGAGCAGGATCACGTCTGCTTATCGTGGAGTCACCAGgagctCAAGGCGGAGGAAATGGCAGGCTAGGATAGGCAAAAGTAGAGGAACGAACGGGATTTACGTGGGGGCATTTAATTCGGAGAGGGACGCAGCTCGAGCTTACGATATAGCATCAATAAGACTGAAGGGGGAAGGGGCAGTGACTAATTTTGATATGTCAACTTATGATATTCAAAGTATTATGAACAATCCTAAGATTCCAATTGGGGATGGAGCTTCAAAGTTGCTCAGAGACAACACTGTGGGACAAGTTCTTCATGCTCGAAGACGAATTACCTACCCACAGCATCCCAATTACATTAATCATCTCGTTCCCTCTTCCTCCGCTGCTCAATACAACAccaacattaataataataatgacctCATCCCCAATATCCAAACTGATGACGATGATATTGATATCTCTGCGATGTCGTTTGAACAAATCCAAGAGATTCTTAAAGATATGGATATTGATGGGATTATGAGAGAGATCATGACGGAGCTGGAGGGGACGGAATTGTTTGATGAGAGTGTGATGGATGAACTGCTGGGTGAAAGTGACAAGTGGAGTAGCAGGAATAGTGGTAAGGATTATTTTGGGAATTGGACGGAGGAGGATATTATTGATTCCATTACTACTTTTTTTACTCACCAAGCTTCTGCTGCTCCACCCTCTCCCTCTAATTCATCCATCTTTCAACCTTCAACCAGCTCCCCACCACCTCCACCCCCACAAATGGATTAA 771 0.4267 MSRITSAYRGVTRSSRRRKWQARIGKSRGTNGIYVGAFNSERDAARAYDIASIRLKGEGAVTNFDMSTYDIQSIMNNPKIPIGDGASKLLRDNTVGQVLHARRRITYPQHPNYINHLVPSSSAAQYNTNINNNNDLIPNIQTDDDDIDISAMSFEQIQEILKDMDIDGIMREIMTELEGTELFDESVMDELLGESDKWSSRNSGKDYFGNWTEEDIIDSITTFFTHQASAAPPSPSNSSIFQPSTSSPPPPPPQMD 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1275 256 MobiDBLite consensus disorder prediction 227 243 - -
Sto8g1275 256 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 121 - -
Sto8g1275 256 CDD AP2 6 67 IPR001471 GO:0003700|GO:0006355
Sto8g1275 256 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM ISOFORM X1 5 121 - -
Sto8g1275 256 SUPERFAMILY DNA-binding domain 6 67 IPR016177 GO:0003677
Sto8g1275 256 Gene3D AP2/ERF domain 7 67 IPR036955 GO:0003700|GO:0006355
Sto8g1275 256 ProSiteProfiles AP2/ERF domain profile. 7 65 IPR001471 GO:0003700|GO:0006355
Sto8g1275 256 MobiDBLite consensus disorder prediction 227 256 - -
Sto8g1275 256 Pfam AP2 domain 7 57 IPR001471 GO:0003700|GO:0006355
Sto8g1275 256 SMART rav1_2 7 71 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1275 Sto-Chr8 8005313 8006329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1275 5 70 AP2-EREBP Transcription Factor Family AT3G20840 35.135 1.42e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto8g1275 AP2 1.4e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1275 K09285 - zju:112488887 125.561