Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1268 TTGAACTCCGATGGCCTCTCTCTCCTCGCCCTCAAAGCCGCCGTTGAGTCCGACCCTTCCGGCGTTCTCAGCTCGTGGACCGATTCCGACTCCACCCCATGTCGCTGGGCCGGCGTGGTCTGTTCCCACGACCGAGTCACCCAACTCGTCTTGCCCAACAAAGGCCTAACCGGCTACATCCCCTCCGAACTCGGCTTGCTCTACTCCCTCAAGCAACTAACTCTTTCTCACAACAACTTCTCCAACGTTATACCTTCCCGTCTCTTCAACGCCACTGATTTGGTAGTTCTAGACCTCTCTCATAACTCCCTCTCTGGTCCTATACCAACTGAAATCACGTCTCTGAAATCACTCAGACATTTGGATTTGTCCTCAAATTCGCTCAATGGCTCTCTCCCTGAAGCTCTATCGGACCTCACTGGCCTCGTTGGAACCTTGAATCTGTCTTACAATCACTTCTCCGGTGGGATTCCAGAGTCCTTCGGGGGACTACCTGTGATTGTTAGTTTGGATCTCCAGAACAACAATCTGACGGGTAAAATCCCTCAAGTCGGTTCGTTGCTAAACCAGGGCCCTACAGCTTTTTCTGGTAACCCCGGGCTCTGTGGGTTCCCACTGCAGAATGCATGCCCTGAAGCTCAAAACCCTGATTTCCCGAGCACCGAAaacccccaaaaccctaaaacgctTGACCCTGGCTTCCCGAGGGGGATTCCAGAGGAGAAGGCGAAAGCGCGAGGCGGGTCCGTTATTGTCGCTATAATTTCCGGCGTCTCGTTGATGGTAGGGGCTGTTTCGTTGTTGGTGTGGCTGTTCCGTAGAAGATGGTCGGGTGATGAGAGCGAATTGGGGAAGCAGAAATTAGACAATGAAGTTgaggaaggaggaggaggaggagaaggtcAAAAAGGCAAATTCGTGATCGTTGATGAAGGGTTCAATTTGGAATTGGAGGATTTATTGAGGGCATCGGCGTATGTGGTGGGGAAGAGCAGGAGCGGGATTGTGTATAAGGTGGTGGCTGCCGGGAAGGGTTCGTGCCCGGCGGCGAGTGTGGTGGCCGTCCGGCGGTTGAGTGAGGGTGATTCCACATGGAAGCTGAAGGAGTTCGAGGCTGAGATGGAGGCCATTGGGAGGGTCCACCACCCAAATGTTGTTCGGTTAAGAGCATATTACTATGCAAATGATGAAAAACTAATCATCACTGATTTCATTCGCAATGGAAGCTTGCACACTGCACTTCATGGTGGACCTTCCAATCCTTTGCCACCATTATCATGGGCTGCAAGGTTAAAAATTGCTCAAGGAGCTGCAAGGGGCTTAATGTACATACACGAGTTCAATGGTCGAAAATATGTCCATGGTAACCTTAAATCAACAAAAATCTTACTGGACGATGATCTCCATCCTTACATATCTGGTTTTGGACTAACTCGTCTGGGCTTGACTACCTCAAAGTCTAGTATCTCAATGGCACCAAAACGGCAGAATTCAAAACAGTCTATTGCAACCTCTGCAGTGACAAATACCCATAGCAACAACTATTTGGCACCTGAGGTGCGCATGAATGGTGGCAAGTTAACTCAGAAATGTGACGTATATTCTTTTGGGATAGTGCTTTTAGAACTATTGACGGGTCGGGTGCCAGAATCAGGAGCTGAAAATGAAGGTAAAATGCTAGAGGGTTTTGTGAGGCAGGCATTCAGGGAGGAGAAGCCCTTGTGTGACATTATAGACCAAGCACTCATGTCTGAGGTTTATGCTAAAAAGCAAGTTGTTGCAGTATTTCATGTTGCACTCAACTGCACAGAGCATGACCCAGAATTGCGACCCAGAATGAGAAGTGTGTCTGAGAGCCTTGATCGCATCAAAATACCGTGA 1881 0.4795 LNSDGLSLLALKAAVESDPSGVLSSWTDSDSTPCRWAGVVCSHDRVTQLVLPNKGLTGYIPSELGLLYSLKQLTLSHNNFSNVIPSRLFNATDLVVLDLSHNSLSGPIPTEITSLKSLRHLDLSSNSLNGSLPEALSDLTGLVGTLNLSYNHFSGGIPESFGGLPVIVSLDLQNNNLTGKIPQVGSLLNQGPTAFSGNPGLCGFPLQNACPEAQNPDFPSTENPQNPKTLDPGFPRGIPEEKAKARGGSVIVAIISGVSLMVGAVSLLVWLFRRRWSGDESELGKQKLDNEVEEGGGGGEGQKGKFVIVDEGFNLELEDLLRASAYVVGKSRSGIVYKVVAAGKGSCPAASVVAVRRLSEGDSTWKLKEFEAEMEAIGRVHHPNVVRLRAYYYANDEKLIITDFIRNGSLHTALHGGPSNPLPPLSWAARLKIAQGAARGLMYIHEFNGRKYVHGNLKSTKILLDDDLHPYISGFGLTRLGLTTSKSSISMAPKRQNSKQSIATSAVTNTHSNNYLAPEVRMNGGKLTQKCDVYSFGIVLLELLTGRVPESGAENEGKMLEGFVRQAFREEKPLCDIIDQALMSEVYAKKQVVAVFHVALNCTEHDPELRPRMRSVSESLDRIKIP 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1268 626 SUPERFAMILY Protein kinase-like (PK-like) 327 622 IPR011009 -
Sto8g1268 626 Gene3D Phosphorylase Kinase; domain 1 308 404 - -
Sto8g1268 626 PRINTS Leucine-rich repeat signature 94 107 - -
Sto8g1268 626 PRINTS Leucine-rich repeat signature 115 128 - -
Sto8g1268 626 Pfam Leucine Rich Repeat 145 164 IPR001611 GO:0005515
Sto8g1268 626 ProSiteProfiles Protein kinase domain profile. 322 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1268 626 Pfam Protein tyrosine and serine/threonine kinase 328 620 IPR001245 GO:0004672|GO:0006468
Sto8g1268 626 MobiDBLite consensus disorder prediction 213 228 - -
Sto8g1268 626 SUPERFAMILY L domain-like 7 207 - -
Sto8g1268 626 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 2 625 - -
Sto8g1268 626 Gene3D Ribonuclease Inhibitor 2 57 IPR032675 -
Sto8g1268 626 Gene3D Ribonuclease Inhibitor 58 218 IPR032675 -
Sto8g1268 626 Pfam Leucine rich repeat N-terminal domain 2 42 IPR013210 -
Sto8g1268 626 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 2 625 - -
Sto8g1268 626 Pfam Leucine rich repeat 69 128 IPR001611 GO:0005515
Sto8g1268 626 Gene3D Transferase(Phosphotransferase) domain 1 405 625 - -
Sto8g1268 626 SMART LRR_typ_2 115 139 IPR003591 -
Sto8g1268 626 SMART LRR_typ_2 67 91 IPR003591 -
Sto8g1268 626 MobiDBLite consensus disorder prediction 212 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1268 Sto-Chr8 7969208 7972050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1268 1 624 Receptor kinase-like Gene Family AT3G57830 61.491 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto8g1268 PK_Tyr_Ser-Thr 6.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1268 - - gmx:100796011 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1268 8 7969208 7972050 Sto8g1268 8 7969208 7972050 ECH