Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1253 ATGGCTTTCAGCGTTGATCACACCAATATTCCCAACTCCGCTCCAATGGAACCACTCCCTCTCGCACCACCGCCCCATCACCATCTTCCTCAGCTTCATGACCCCCGAATTCCCTTTGGACTCACGCACCCTTCCCCTTCCTCCTCTATCCCCGGAAATTATCTAAGCAAGGATTCCGGAGCCTATGATTTAGCCGAGAACTCCTCCTCAGGAATGAGGCCTCCCACACTCAACATATTTCCATCGCAGCCTATGCACGTAGACCCACCATCATCTAAGGCAAGCATGGAATTGGTTTCCCCACAGAGCAGTGGTTCCAAGAGACCATCAGAGCCGTCCATGGAGTTGGCCGCCAACCCACAGAACGAAGGCGCCTCCGCCCCTCAATCTGCCAAAACTCCGCGGGAGAGCACTACTGCTCGCAAGGGTCCAACCTCAAGTTCTGAACAGGAAGGACCTAAAACACCTGACCCCAAGACACTGAGAAGACTTGCTCAGAATAGGGAGGCAGCAAGGAAAAGCCGGCTGAGGAAAAAGGCTTATGTGCAGCAGCTAGAAACAAGTAGGATGAGGCTGAATCAGCTGGAACAAGAGTTGCAGCGTGCTAGAGCTcaaGCGCACTTTTGGGAGGAGATCAGCAAGGCGTTCCTGTGGCCATGA 660 0.5348 MAFSVDHTNIPNSAPMEPLPLAPPPHHHLPQLHDPRIPFGLTHPSPSSSIPGNYLSKDSGAYDLAENSSSGMRPPTLNIFPSQPMHVDPPSSKASMELVSPQSSGSKRPSEPSMELAANPQNEGASAPQSAKTPRESTTARKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRMRLNQLEQELQRARAQAHFWEEISKAFLWP 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1253 219 MobiDBLite consensus disorder prediction 62 77 - -
Sto8g1253 219 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 157 201 IPR004827 GO:0003700|GO:0006355
Sto8g1253 219 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 53 208 - -
Sto8g1253 219 PANTHER TRANSCRIPTION FACTOR TGA9 53 208 - -
Sto8g1253 219 SUPERFAMILY Leucine zipper domain 159 202 IPR046347 GO:0003700|GO:0006355
Sto8g1253 219 MobiDBLite consensus disorder prediction 155 171 - -
Sto8g1253 219 MobiDBLite consensus disorder prediction 1 178 - -
Sto8g1253 219 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 162 177 IPR004827 GO:0003700|GO:0006355
Sto8g1253 219 Coils Coil 178 212 - -
Sto8g1253 219 SMART brlzneu 155 215 IPR004827 GO:0003700|GO:0006355
Sto8g1253 219 MobiDBLite consensus disorder prediction 95 154 - -
Sto8g1253 219 Pfam bZIP transcription factor 159 198 IPR004827 GO:0003700|GO:0006355
Sto8g1253 219 Gene3D - 158 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1253 Sto-Chr8 7915109 7917320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1253 72 209 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 58.219 4.80e-39 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto8g1253 bZIP_1 2.2e-08 CL0018