Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1233 ATGTTTTCGTGGTTGGCAAGGATAGTTTCTGCGTGCTTGAGACCCGTGAGGCGGTATGCCCGTATGAACAGGGATGATATGGATGCCTATTCTTCCTCTGAAGATGCTCTCCTCTGGCACAAGGACCTCGAGAAGCACTCATGCGGCGAATTCTCCTTTGCTGTGGTTCAGGCGAATGAAGTAATTGAGGATCAAAGCCAGGTTGAGACGGGGCCAGACGCCGTGTTCGTTGGGATATACGATGGTCATGGCGGTCCCGAAGCGTCCCGCTACATCTGCGACCACCTCTTCCATCATCTAATGAGCCCCAGTCGGTATGTATTGTTTGTATCGTTGCTCCTGTTCATACTGCTCATTATTGACATTGCAAAGAACTGGCCTCCAGGACTCGGTGTTGAAATTTCTGGGATTGCTCGAGAAAATGGTACTATGTCTGAAGAAATACTCAGAGATGCCTTCTCTGCTACTGAGGAAGGGTTCCTGAGTCTTGTTCGAAGGACATATGGTATAAAGCCATTGATAGCAGCAATGGGTTCCTGTTGTTTGGTGGGTGTTATTTGGAAAGGGACATTATATGTTGCCAATCTTGGAGACTCTCGCGCTGTAATTGGTTCTATAGGTGGGTCTAATAAGATCATTGCCGAGCAGTTGACCAGAGAGCACAATGCTAGCAGAGAGGAGATTAGACGAGAACTCAGGTCCTTGCATCCAGAAGATTCACAAATAGTAGTCATGAAGCATGGAACATGGCGCATTAAAGGCATCATCCAGGTATCAAGAAGTATAGGTGATGCATATTTGAAGAGACCAGAGTTCTCTTTTGATTCTTCATTCCCACGGTTCCACCTGCCTGATCCAATCCGTCGGCCTGTGCTAACAGCAGAACCATCTACATGTACAAGAGTTTTACAACCAAATGATAAATTCCTTATATTTGCATCTGATGGGCTTTGGGAACACCTGACAAATCAGGAAGCTGCTGAGATTGTTTATAATAATCCACGAACTGGGATTGCAAGAAGACTTGTAAGAGCGGCCCTAGACGTGGCAGCCAGGAAAAGGGAAATGAGATTTAAAGACATTCAGAAGGTTGAGAAGGGGATCAGGCGGTTTTTTCATGATGATATCACAGTAGTCGTTGTGTTCATTGACCATGGAAAGAAGATGACCGTACCAGAGTTGTCCATCAAAGGTTTTATTGACAAGGGCAGTGGCAATCACTTTCTGTTTCAGAGAATCTCAGATCATGTACTTGATCACTATGATAATAAGGATAACTCCAGTAAAGAATTGTTGATTCAACCAAACCAAAACAGTAACAATTCACAACTCTTCTACAACAAAATGATTCATCATACTCTGCCTTTGCAATCCACATCTGCGCCCAGGAATGAAAACATATCAGAAATACTTGCAGTGTGA 1422 0.4444 MFSWLARIVSACLRPVRRYARMNRDDMDAYSSSEDALLWHKDLEKHSCGEFSFAVVQANEVIEDQSQVETGPDAVFVGIYDGHGGPEASRYICDHLFHHLMSPSRYVLFVSLLLFILLIIDIAKNWPPGLGVEISGIARENGTMSEEILRDAFSATEEGFLSLVRRTYGIKPLIAAMGSCCLVGVIWKGTLYVANLGDSRAVIGSIGGSNKIIAEQLTREHNASREEIRRELRSLHPEDSQIVVMKHGTWRIKGIIQVSRSIGDAYLKRPEFSFDSSFPRFHLPDPIRRPVLTAEPSTCTRVLQPNDKFLIFASDGLWEHLTNQEAAEIVYNNPRTGIARRLVRAALDVAARKREMRFKDIQKVEKGIRRFFHDDITVVVVFIDHGKKMTVPELSIKGFIDKGSGNHFLFQRISDHVLDHYDNKDNSSKELLIQPNQNSNNSQLFYNKMIHHTLPLQSTSAPRNENISEILAV 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1233 473 Coils Coil 214 234 - -
Sto8g1233 473 PANTHER ALPHABET, ISOFORM E-RELATED 6 400 - -
Sto8g1233 473 ProSiteProfiles PPM-type phosphatase domain profile. 50 383 IPR001932 -
Sto8g1233 473 CDD PP2Cc 51 383 IPR001932 -
Sto8g1233 473 Pfam Protein phosphatase 2C 144 352 IPR001932 -
Sto8g1233 473 SUPERFAMILY PP2C-like 56 385 IPR036457 -
Sto8g1233 473 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 6 400 - -
Sto8g1233 473 Gene3D - 26 390 IPR036457 -
Sto8g1233 473 SMART PP2C_4 44 381 IPR001932 -
Sto8g1233 473 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1233 Sto-Chr8 7778939 7783068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1233 1 399 PP2C-type Phosphatase Gene Family AT5G06750 65.133 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1233 K01102 - gmx:100778238 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1233 8 7778939 7783068 Sto13g2916 13 34303949 34306617 CCT
Sto8g1233 8 7778939 7783068 Sto8g1233 8 7778939 7783068 ECH