Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1227 ATGGGGTTTGGAGTGAGAAAGGCATACACAAATAAAAGCAAGAAAGATGGCTCTGTCACATCTGTTAGATTTCTTTGTAGCAAGGAAGGGCTGAGAAGAGTAGACAAAAGAGATCATCTAACTAAGAATCCTCGACAAGAAACAAGAACGGATTGCAAAGTTAGAATGGGGCTCACCAACGAGAATGGAATATTTAGAGTCTCTGATTTAATAGAGGACCACAATCACGTTCTTCAAACTCCAAAAACAGCTCATATGTTGCCATCCCAACGTAATATATCAGAAGTTCAAGCACATGAGATTGAGTTAGCTGAAGATTCTGGACTGCAACAAAGAGCGTCGTATGAACTATTCAGTAGACATGTAGGCGGAAGAGATCATCTTGGCTTTACTCGTTTGGATCAAAAGAATTATCTTCGAACCAGAAGACAAAAGAGTTTGAAGTATGGGGAAGCCGGTTGTTTACTAAGATATTTCCAGGAACAGACGTTAATAGATCCATCATTTTATCGTGCTTTTCAGATGGATAATGAAGAACAAATAACCAATATATTCTGGGCTGATGCTAGAATGCGCTTGGATTATGGAGGAGTGGTGATATTTGGAGCTGCATTATTGTATGATGAGACTGCGGCGTCCTTTGAGTGGTTGTTTAAAACATTTTTGGAGGCAAATTTGCAGGAGAAGCCTCAGACCATATTCACTGATCAGGACCCAGCAATGGCTAAAGCATTGCATAAGATACTTGATGCCAACGAAATTATGCATGTTCCTGATCAGTACATTTTAAAGAGGTTGACAAAAGATGCAAGAAGTGGTGTTATAATGGATTTTAAGGGAAACGAAGTTGTGGAAGATCCTAAGTTAGCTCGTACGATGCGATATAGACAACTTTGCCTCAAGCAGATCAAGTTATCCTCTGATGCGGCTGATTTTGAACAAGCATTCTTGTTGGTCGATAAAGCTGTGGATGAATTGATTAAGCAAGTCGCAGAGCTTAGGTTGAAGAGCAATGAAGCTGTAAATCATCCGAACTCTGAAGTACCTAAAGGATATGGGAATCAAATGAACTTTGATGTGCCTTCTAGATCTGAGAATACATTTAGTTTTACCAaatttttgatgGAGCCCCTCCTTACGCCCCTTGGAGGATCAGAGTTCTATGGTGGTTTTTCAAATGAGAATGATGACCAAGCTAGTGAATAA 1206 0.3955 MGFGVRKAYTNKSKKDGSVTSVRFLCSKEGLRRVDKRDHLTKNPRQETRTDCKVRMGLTNENGIFRVSDLIEDHNHVLQTPKTAHMLPSQRNISEVQAHEIELAEDSGLQQRASYELFSRHVGGRDHLGFTRLDQKNYLRTRRQKSLKYGEAGCLLRYFQEQTLIDPSFYRAFQMDNEEQITNIFWADARMRLDYGGVVIFGAALLYDETAASFEWLFKTFLEANLQEKPQTIFTDQDPAMAKALHKILDANEIMHVPDQYILKRLTKDARSGVIMDFKGNEVVEDPKLARTMRYRQLCLKQIKLSSDAADFEQAFLLVDKAVDELIKQVAELRLKSNEAVNHPNSEVPKGYGNQMNFDVPSRSENTFSFTKFLMEPLLTPLGGSEFYGGFSNENDDQASE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1227 401 Pfam FAR1 DNA-binding domain 1 79 IPR004330 -
Sto8g1227 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 198 249 IPR031052 GO:0006355
Sto8g1227 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 199 IPR031052 GO:0006355
Sto8g1227 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 247 348 IPR031052 GO:0006355
Sto8g1227 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 2 199 - -
Sto8g1227 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 247 348 - -
Sto8g1227 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 198 249 - -
Sto8g1227 401 Coils Coil 323 343 - -
Sto8g1227 401 Pfam MULE transposase domain 195 248 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1227 Sto-Chr8 7761377 7763761 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto8g1227 FAR1 1.6e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1227 - - aprc:113850480 302.367