Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1214 ATGTTGTGCTGCGGAGGATCAGAGGAGGAGAGCAGTGGCCCACCTGCAAACCAATATACTGCACCACCCAGAGGTGGTAATGCATATAGAGAAGgagAAGGGGGTGACAGAGGAGAGCCAAGAAGCAATGTTGTGAGGAATGGTGCTCCCCAGAAAGTATTGCCAATTGAGACCCCTTCAATACAATTGGATGAGTTAAATAGGTTAACCAACAACTTCGGCTCTTCTTCTTTGATTGGAGAAGGTTCCTATGGACGTGTTTTCTATGCCAAGTTAAGCGACGGTCAGGATGCAGCCATCAAGAAGCTTGATACCAGTTCTTCCACCCCTGAAGAAGACGCCGATTTTGCAGCTCAGTTATCTGTGGTTTCAAGATTGAAGCATGACAACTTCGTGGAGTTGATTGGATATTGTCTGGAGGCAAGTAACAGAATTTTGGTTTACCAACATGCAAGTTTGGGTTCTTTGCATGACGTATTACATGGGAGGAAAGGTGTACAAGGGGCAGAACCAGGTCCAGTTCTAAGCTGGAGCCAGAGAGCGAAAATAGCACTTGGAGCAGCAAAAGGGCTGGAGTTTCTTCATGAAAAGGTTCAGCCTTCTATAGTTCATCGCGATATTAGATCCAGCAATGTCTTACTCTTCGGTGACTATGACGCCAAGATTGCCGATTTCAGCTTGACCAATCAGTGCTCTGACACTGCTGCTCGCCTCCATTCCACAAGAGTCTTGGGAACATTTGGCTATCACGCTCCagaGTATGCCATGACGGGGCAGATAACACAGAAAAGCGATGTTTACAGTTTTGGAGTTGTGCTTTTAGAACTCTTGACAGGAAGAAAACCAGTAGATCACACAATGCCCAAAGGCCAACAAAGTCTTGTGACTTGGgcaactCCAAGGCTGAGCGAGGACAAAGTGAAACAGTGtgtagatcccaagctaaacaaTGAGTATCCGCCAAAGGCTATTGCTAAGTTGGCAGCGGTTGCAGCACTTTGTGTTCAGTATGAGGCTGACTTCCGGCCCAACATGACCATTGTTGTGAAAGCTCTGTCCCCACTTCTCAATGCAAAACCGGCTGGAGCAGAACCTAGTGCTTGA 1104 0.4574 MLCCGGSEEESSGPPANQYTAPPRGGNAYREGEGGDRGEPRSNVVRNGAPQKVLPIETPSIQLDELNRLTNNFGSSSLIGEGSYGRVFYAKLSDGQDAAIKKLDTSSSTPEEDADFAAQLSVVSRLKHDNFVELIGYCLEASNRILVYQHASLGSLHDVLHGRKGVQGAEPGPVLSWSQRAKIALGAAKGLEFLHEKVQPSIVHRDIRSSNVLLFGDYDAKIADFSLTNQCSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALSPLLNAKPAGAEPSA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1214 367 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Sto8g1214 367 PANTHER OS03G0226300 PROTEIN 1 365 - -
Sto8g1214 367 Gene3D Transferase(Phosphotransferase) domain 1 152 363 - -
Sto8g1214 367 SUPERFAMILY Protein kinase-like (PK-like) 52 352 IPR011009 -
Sto8g1214 367 ProSitePatterns Tyrosine protein kinases specific active-site signature. 202 214 IPR008266 GO:0004672|GO:0006468
Sto8g1214 367 MobiDBLite consensus disorder prediction 1 48 - -
Sto8g1214 367 ProSiteProfiles Protein kinase domain profile. 73 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1214 367 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 365 - -
Sto8g1214 367 Pfam Protein tyrosine and serine/threonine kinase 78 352 IPR001245 GO:0004672|GO:0006468
Sto8g1214 367 Gene3D Phosphorylase Kinase; domain 1 41 150 - -
Sto8g1214 367 SMART tyrkin_6 73 352 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1214 Sto-Chr8 7689315 7691008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1214 37 366 Receptor kinase-like Gene Family AT3G58690 43.413 2.64e-87 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Sto8g1214 PK_Tyr_Ser-Thr 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1214 - - gmx:100786291 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1214 8 7689315 7691008 Sto8g1214 8 7689315 7691008 ECH