Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1207 ATGGACAATTCCGAAAGAGAGACCCATGACTTCATGAACGTCCACTCTTTCTCTGAGCTTCCCTTCATCCGCCCTCCTCCCCCTCTCAAAGAAAAGCCCGTCAAGCTTTTCGGCATTGAATTCCCCAACGCCAACGCCAACTCCAACTCCCCTGACCACAACGCCACCACCAAAGAGGCCTCCGGCAGCGAGGGCGGGGAAAGCAACCGCCGCTTCGAGTGCCACTACTGTTGCAGAAACTTCCCCACTTCTCAAGCCTTAGGCGGCCACCAAAACGCCCATAAACGAGAGCGCCAGCACGCCAAGCGAGCACACCTCCAGTCCGCCATGGTGCACAACATGGACCCACACCATCATATCTACCGCCTCGGCTCCCCTCACTCCCACCTCCCCTATCCTACGTGGCAGTGGCACCATCCTCCTCGAGACACTTCTACGACTACAACTGCAAGGCTTTACGGAATTGGAAGCCATGCTACCTCTGCCTCTGCCACCTCCTatactcctcctcctcctcctaatTCTCAGCCCATCAACGGTAGTCCCTTGCCCTTGTGGCGAATCCCTACCAGCTTCAATCCTGACCGTTCCTTTTCTCCCGCCCACCAAATTAACCTCACGCCTAATTCCCACCTTCTTCCCTCCACTTCACAGAATCGCTTCGTTTATGACTCTAAACCCACCGTCCAAGATCATACTCGGCAATCAGCATGTACAAGGCAGGCCAATAAAACTGCACTTATCCCAAAGGAATGCAGTTTCTATGAATCAGCTGATTGA 780 0.5269 MDNSERETHDFMNVHSFSELPFIRPPPPLKEKPVKLFGIEFPNANANSNSPDHNATTKEASGSEGGESNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHNMDPHHHIYRLGSPHSHLPYPTWQWHHPPRDTSTTTTARLYGIGSHATSASATSYTPPPPPNSQPINGSPLPLWRIPTSFNPDRSFSPAHQINLTPNSHLLPSTSQNRFVYDSKPTVQDHTRQSACTRQANKTALIPKECSFYESAD 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1207 259 MobiDBLite consensus disorder prediction 43 68 - -
Sto8g1207 259 MobiDBLite consensus disorder prediction 43 63 - -
Sto8g1207 259 MobiDBLite consensus disorder prediction 160 181 - -
Sto8g1207 259 PANTHER ZINC FINGER PROTEIN GIS 1 233 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Sto8g1207 259 SUPERFAMILY beta-beta-alpha zinc fingers 69 100 IPR036236 -
Sto8g1207 259 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Sto8g1207 259 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
Sto8g1207 259 Pfam C2H2-type zinc finger 71 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1207 Sto-Chr8 7621568 7625956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1207 3 191 C2H2 Transcription Factor Family AT2G41940 48.357 2.87e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1207 - - rcu:8268101 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1207 8 7621568 7625956 Sto13g2945 13 34452466 34454143 CCT
Sto8g1207 8 7621568 7625956 Sto8g1207 8 7621568 7625956 ECH