Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1197 ATGGGGGTGGATTCGTTGTCATCGGAGTCGAGCTTCGATCTCGACGAGCAGATCTCACAGCTCATGCAATGCAAGCCACTGTCAGAGCAACAgCCTGGGTTTGTGCGCCGTATCGCCGAAGATAGGGATATTCTGAGAATTGAAGAGAAAACCGGATTTTCACGTATGACCAGTCATTGGGAGTGGGATGTTATTAGTGGCTTCAATAGAGGTGCTGCTAAAGTAAAGGTTGTTCACCGTAAGTGCTTCCTTGTTAGCATCTTGGTGGAAGTGGTCAGAGTTCTGTGCGAAAAGGCTAAGGAGATTTTAATGGATGAAAGTAATGTCCAGCCTGTGAAAAGCCCTGTGACAATTTGTGGTGATATTCACGGGCAGTTCCATGATCTTGCTGAACTATTTCGAATTGGAGGGAAGTGTCCAGATACTAACTACTTGTTTATGGGAGATTATGTGGACCGGGGTTATTATTCAGTTGAAACTGTAACTAACTGGCAGGGCATTAGCATTTGCCCAAGGTATTCAAAGGTGAAAAGGACCATTAAATGCATGAGGCCAGAAGGGCTTGGAGAGTGCTCCCTTGAGTGA 585 0.4564 MGVDSLSSESSFDLDEQISQLMQCKPLSEQQPGFVRRIAEDRDILRIEEKTGFSRMTSHWEWDVISGFNRGAAKVKVVHRKCFLVSILVEVVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTNWQGISICPRYSKVKRTIKCMRPEGLGECSLE 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1197 194 PRINTS Serine/threonine phosphatase family signature 115 142 IPR006186 GO:0016787
Sto8g1197 194 PRINTS Serine/threonine phosphatase family signature 144 171 IPR006186 GO:0016787
Sto8g1197 194 SMART pp2a_7 87 187 IPR006186 GO:0016787
Sto8g1197 194 SUPERFAMILY Metallo-dependent phosphatases 86 161 IPR029052 -
Sto8g1197 194 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 42 - -
Sto8g1197 194 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 90 169 - -
Sto8g1197 194 Pfam Calcineurin-like phosphoesterase 115 164 IPR004843 GO:0016787
Sto8g1197 194 Gene3D - 7 169 IPR029052 -
Sto8g1197 194 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-4 CATALYTIC SUBUNIT 1 42 - -
Sto8g1197 194 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-4 CATALYTIC SUBUNIT 90 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1197 Sto-Chr8 7561583 7564153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1197 56 160 Calmodulin-binding Proteins AT5G63870 34.234 2.33e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1197 K04382 - ath:AT3G58500 151.754