Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1192 ATGTTCTATACGTCTGATCCAAGTATTCCAGAAATTTCTCCTTGCGTCACTCCTCTTTTATTGGATATATGGGCCGCAAGGATTATTGGAGGAACTTCAATTGCCATCCTTCGTGTCACGCACCTCATCGAGATAATGAAGATCATCGCTGCGTATTTGCTAGCCCAGTTGGGAGGCATCATTAATCCTTCCGCAGATGATATCAAGAACATCCTTGCctctggtatatatatatatatatatatgtacttctACACATTTGGAATAGAAGCTGAAGATTCTAAAATAGAATATCTTTTGTCTCAAGTGGAGGCTAAAGATATAACAGAACTTATTGCCATGGGTAGGCAAAAGATGGCGTCCATGCCTAGTGGTGGCGCTGCTGCCGTTGCCGTGGCTGCACCTTCCGGGGGAGGTGGCGCCGCCGCGGCTGCTCCAATTGCTTTTGAGACACAGAAAGTGGAAAAGGTGGAGGAGAAAGAAGAGTCAGATGATGACATGGGATTCAGCCTCTTTGATTAA 522 0.433 MFYTSDPSIPEISPCVTPLLLDIWAARIIGGTSIAILRVTHLIEIMKIIAAYLLAQLGGIINPSADDIKNILASGIYIYIYMYFYTFGIEAEDSKIEYLLSQVEAKDITELIAMGRQKMASMPSGGAAAVAVAAPSGGGGAAAAAPIAFETQKVEKVEEKEESDDDMGFSLFD 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1192 173 Gene3D - 45 76 IPR038716 -
Sto8g1192 173 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 46 173 IPR044076 GO:0002182|GO:0003735|GO:0022625
Sto8g1192 173 Pfam 60s Acidic ribosomal protein 87 172 - -
Sto8g1192 173 MobiDBLite consensus disorder prediction 154 173 - -
Sto8g1192 173 Hamap 50S ribosomal protein L12 [rpl12]. 47 173 IPR027534 GO:0003735|GO:0005840|GO:0006414
Sto8g1192 173 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 46 173 - -
Sto8g1192 173 CDD Ribosomal_P2 46 173 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1192 Sto-Chr8 7530262 7532887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1192 46 173 Cytoplasmic Ribosomal Protein Gene Family AT3G28500 47.287 4.31e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1192 K02943 - nnu:104585963 107.842