Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1167 ATGGAGAAAGCAAATTCATGTAGTGGGCTAGTGAGAACGAAATCGGATCAGCTGTTGGAGACGGTGGTAGCAGCGCTGAAGTCAGCGCCGTCGAATGAGTCAATCAATGGAATGGTGGACAGTGGGGGGAGCGGCGGCGGAGGAACACCGTCGAGGAAGTCAAGCCGGCGGATGTCGCCGGGACGGAGCGGGGGCGGGAAAAACACTCATATTAGGAAGAGTAGGAGTGCGCAAATAAAGCTGGATTTAGACGAAGTCGGAAGCGGAGCCGCGCTTAGCCGAGCTTCCAGCGCCAGCTTGGGCCTCTCTTTCTCCTTCACTGGCTTCACAATCCCTCCCGAAGAAAACTCCGACTTTAAGCCCTTCAGCGACGATGATATTCCGGAGGATATTGAAGCTGGAATTTGCAAGCCAAAGTTTCAAACGGAACCCACTTTGCCCATTTTTCTAAAGTTTAAGGATGTGACCTACAAGGTGGTGATCAAGGGCATGACAACAAGTGAGGAGAAGGATATCTTAAATGGGATCACTGGGTGTGTGAATCCAGGAGAAGTTTTGGCATTGATGGGACCCTCAGGTAGTGGAAAGACTACACTTTTGAGTTTGCTAGGAGGCAGGTTGATCCAGTCCACTAACGCAGGTGGCTCCATCACTTATAATGACCAAACATATACCAAGTTCCTCAAGAGCAGAATAGGATTCGTGACTCAAGATGATGTTCTGTTTCCTCACCTTACTGTCAAAGAAACAATTACATATGCTGCCCGCCTACGACTCCCAAAGACATTGACAAAGGAGCAAAAGGAAAAACGAGCTTTGGATGTCATCTATGAGCTTGGCTTGGAGAGGTGCCAAGACACTATGATTGGTGGCTCCTTTGTTCGTGGAGTATCTGgtggagagaggaagagagttTGCATTGGTAATGAGATAATCATCAATCCTTCTGTTCTGTTTCTTGACGAACCAACTTCTGGTTTGGATTCCACAACAGCATTGAAGATTGTTCAGATGCTACATGACATAGCAGAGGCTGGGAAAACAGTAGTGACAACAATTCATCAACCATCAAGCAGACTGTTTCACAAATTTGATAAGTTGATCCTTCTGGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCAGAAGCAATGTCTTACTTCCAATCTATAGGATGTAGCCCTCTCATTGCCATGAATCCAGCAGAATTTTTGCTAGACCTTGCAAATGGAAACATAAATGATGTCTCTGTACCATCAGAGTTAGAAGACAAAGTGCAGATGGGAAATGCAGAAACTGAAACAAAGAATGGGAAGCCATCACCAGCAGTTGTACACGAGTATCTGGTAGAGGCATATGAGACTCGAGTTGCAgaaacagagaagaaaaagCTAATGGTTCCTATCCCTATGGATGAATCGCTCAGGGTTTCTTCTTCTAAAAGACAATGGGGAGCAAGCTGGTGTGAGCAATATTCCATATTGTTTTGCAgaggaataaaagaaagaaggcACGAATACTTCAGCTGGTTAAGAATCACCCAAGTTCTCTCCACAGCAGTCATCTTGGGATTACTTTGGTGGCAGTCAGATGCTAACAATCCCAAAGGTCTTCAAGATCAGGCAGGGCTACTGTTCTTCATTGCGGTGTTCTGGGGATTCTTCCCTGTGTTCACAGCAATATTCACATTTCCTCAAGAGAGAGCCATGCTGGCTAAGGAGCGAGCAGCTGACATGTACAGACTAAGTGCATACTTCGTAGCCAGGACTACAAGTGACCTTCCATTGGACTTGATATTACCAGTACTATTCCTGCTTGTTGTTTATTTCATGACCGGTTTGAGACTAAGTGTTGACTCCTTTTTCTTCAGCATCCTCACCGTCTTCCTCTGCATTGTGGCAGCTCAGGTGGTGAAGCAGGGGCTTGGGCTCGCTATTGGGGCCACATTGATGGACTTAAAAAGAGCGACGACTCTGGCTTCCGTTACTGTGATGACCTTCATGCTAGCTGGAGGGTTTTTTGTGAAGGAAGTACCTATATTCATAGCGTGGATTCGGTACATGTCGTTTAACTACCACACGTATAAACTACTACTGAAGGTGCAATACGGAGGAATGACGAGGGGAGTAATGGGGATGAGAATTGATAGTGGATGGAGAGAGGTGGGTGCTTTGATAGCTATGGTTTTTGGATACCGCTTATTGGCGTACCTTTCTTTGAGACGCATGAAGCTTCAATGTGGAGCTTAA 2250 0.4493 MEKANSCSGLVRTKSDQLLETVVAALKSAPSNESINGMVDSGGSGGGGTPSRKSSRRMSPGRSGGGKNTHIRKSRSAQIKLDLDEVGSGAALSRASSASLGLSFSFTGFTIPPEENSDFKPFSDDDIPEDIEAGICKPKFQTEPTLPIFLKFKDVTYKVVIKGMTTSEEKDILNGITGCVNPGEVLALMGPSGSGKTTLLSLLGGRLIQSTNAGGSITYNDQTYTKFLKSRIGFVTQDDVLFPHLTVKETITYAARLRLPKTLTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSVLFLDEPTSGLDSTTALKIVQMLHDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMSYFQSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQMGNAETETKNGKPSPAVVHEYLVEAYETRVAETEKKKLMVPIPMDESLRVSSSKRQWGASWCEQYSILFCRGIKERRHEYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLAKERAADMYRLSAYFVARTTSDLPLDLILPVLFLLVVYFMTGLRLSVDSFFFSILTVFLCIVAAQVVKQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKEVPIFIAWIRYMSFNYHTYKLLLKVQYGGMTRGVMGMRIDSGWREVGALIAMVFGYRLLAYLSLRRMKLQCGA 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1167 749 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 397 IPR003439 GO:0005524
Sto8g1167 749 Pfam ABC-2 type transporter 491 703 IPR013525 GO:0016020|GO:0140359
Sto8g1167 749 ProSitePatterns ABC transporters family signature. 297 311 IPR017871 GO:0005524
Sto8g1167 749 Gene3D - 149 391 IPR027417 -
Sto8g1167 749 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 26 743 - -
Sto8g1167 749 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 389 IPR027417 -
Sto8g1167 749 MobiDBLite consensus disorder prediction 29 75 - -
Sto8g1167 749 Pfam ABC-2 type transporter 354 416 IPR043926 GO:0140359
Sto8g1167 749 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 26 743 - -
Sto8g1167 749 SMART AAA_5 182 374 IPR003593 -
Sto8g1167 749 MobiDBLite consensus disorder prediction 47 62 - -
Sto8g1167 749 Pfam ABC transporter 173 325 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1167 Sto-Chr8 7391950 7397311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1167 172 411 Calmodulin-binding Proteins AT2G36910 30.204 2.45e-16 82.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1167 8 7391950 7397311 Sto8g1167 8 7391950 7397311 ECH