Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1161 ATGGGTAACAACTGCGTTGGATCAAGAGTTTCTAAGGACTCACTATTTCTCACTATTCCCAGTTCACTTTGGGGGTCACGACCATCAGACGCTATGGTTTCTCCTACAAGTAATAAATCATCATCTGCAAGTGAAGCAGCAAATACTGAAAAAGAGACTGTTCAAAACAACCCTCCACAAGTACTGAAAATCGTCAAGGAAGAATCAATGAAAGAGACAGAGTCAAAACCAGAGCAGGAGGAGATAAAGCCACCTCATCATCATCCCAAATCCTCAGAAGCAATGGAAGAATCAAGAAAGCCTCAATCAGTCAAAGTAGAGCCCGCAAAACCAAAGAAGCCCCACATCGTGAAGAGGCTAGAATCTGCAGGACTTGAAGCAGATTCTGTTCTGCAAACAAAAACTGGTCATCTCAAGGAGTTTTACAAGTTGGGGAAGAAGCTAGGACATGGGCAATTTGGGACTTCTTTTCTATGTGTAGAAAAAGCCACAGGGAAACAGTATGCCTGCAAGTCCATTGCAAAGAGAAAATTGCTGAACAATGAGGATTTGGAGGATGTGAGGAGGGAGATTCAGATAATGCATCACTTGTCTGGGAGTCCCAATGTGGTATCAATAAAAGGGGCTTATGAGGATGCCATTGCAGTTCATGTGGTGATGGAACTATGTGAAGGGGGTGAGCTGTTTGATAGGATAGTGGAAAGAGGGCATTACACTGAAAGAAAAGCAGCAAAACTTGCAAGGACTATAGTTAGTGCTATAGAAGATTGTCACTCCCTTGGAGTGATGCATCGTGATCTTAAGCCTGAGAATTTTCTCTTTGTTAGTAATGATGAAGACTCTCCCCTTAAGGCCATTGATTTTGGATTGTCCACTTTTTTCAAACCAGGACAAACTTTCACAGATGTGGTGGGAAGTCCTTACTATGTTGCACCTGAAGTTCTTGGAAAGCGATATGGTCCAGAATCTGATGTGTGGAGTGCTGGTGTGATGATTTACATCCTGCTATGTGGGGTGCCTCCATTTTGGGCTGAATCGGAGCAAGAGATATTTGCTGAGGTGTTAAATGGAGAGCTTGATTTCTCATCAAATCCTTGGCCTAAAATCTCTGAAAGTGCAAAAGACTTGGTGAGGAAGATGCTTGTTAGAGATCCAAGGAAACGGATAACTGCACATGAAGTTCTTCGTCATCCTTGGATTCAGGTTGATGGAGAAGCTCCTGATAAGCCTCTTGATTCCGCAGTTCTGAGTCGCCTAAAGCAGTTTTCTGCCATGAACAAGCTTAAGAAAATGGCTATTCGAGTGATTGCTGAGAATCTGTCTGAAGAAGAAATTGCTGGATTGAAAGAAATGTTCAAGATGATAGACACAGACAACAGTGGTCAAATTACCTTTGAAGAACTCAAGAATGGGCTAAAAAGATTCGGTGCTAATCTCAATGAATCAGAAATACAAAATCTAATGCAAGCTGCAGATGTAGATAAGAGTGGGACAATAGACTATAAAGAATTCATAGCAGCAACATTGCATTTAAACAAATTTGAGAGGGAAGATCATTTAGCTGCAGCTTTCTCTTACTTTGATAAAGATGGAAGTGGCTACATTACTCAGGATGAGCTTCAACTTGCTTGTCAAGAATTAGGCATGCAAGATCTTCTCTTAGAAGAAATTATCAGAGAAGCAGATCAAGATAACGATGGGCAAATAGATTACAAAGAATTTGTGGCTATGATGCAGAAAGGAAATGGAGGATTGGGTCAAAAGGGTAGAAATAGTTTTAAGATTGGGTATAGGGAGGCATTATCAGTATGCTAA 1815 0.4116 MGNNCVGSRVSKDSLFLTIPSSLWGSRPSDAMVSPTSNKSSSASEAANTEKETVQNNPPQVLKIVKEESMKETESKPEQEEIKPPHHHPKSSEAMEESRKPQSVKVEPAKPKKPHIVKRLESAGLEADSVLQTKTGHLKEFYKLGKKLGHGQFGTSFLCVEKATGKQYACKSIAKRKLLNNEDLEDVRREIQIMHHLSGSPNVVSIKGAYEDAIAVHVVMELCEGGELFDRIVERGHYTERKAAKLARTIVSAIEDCHSLGVMHRDLKPENFLFVSNDEDSPLKAIDFGLSTFFKPGQTFTDVVGSPYYVAPEVLGKRYGPESDVWSAGVMIYILLCGVPPFWAESEQEIFAEVLNGELDFSSNPWPKISESAKDLVRKMLVRDPRKRITAHEVLRHPWIQVDGEAPDKPLDSAVLSRLKQFSAMNKLKKMAIRVIAENLSEEEIAGLKEMFKMIDTDNSGQITFEELKNGLKRFGANLNESEIQNLMQAADVDKSGTIDYKEFIAATLHLNKFEREDHLAAAFSYFDKDGSGYITQDELQLACQELGMQDLLLEEIIREADQDNDGQIDYKEFVAMMQKGNGGLGQKGRNSFKIGYREALSVC 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1161 604 ProSiteProfiles Protein kinase domain profile. 142 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1161 604 SMART serkin_6 142 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1161 604 Gene3D Transferase(Phosphotransferase) domain 1 228 424 - -
Sto8g1161 604 SUPERFAMILY EF-hand 439 580 IPR011992 -
Sto8g1161 604 ProSitePatterns EF-hand calcium-binding domain. 562 574 IPR018247 -
Sto8g1161 604 Pfam EF-hand domain pair 518 579 IPR002048 GO:0005509
Sto8g1161 604 Pfam EF-hand domain pair 448 508 IPR002048 GO:0005509
Sto8g1161 604 SMART efh_1 553 581 IPR002048 GO:0005509
Sto8g1161 604 SMART efh_1 519 547 IPR002048 GO:0005509
Sto8g1161 604 SMART efh_1 483 511 IPR002048 GO:0005509
Sto8g1161 604 SMART efh_1 447 475 IPR002048 GO:0005509
Sto8g1161 604 CDD EFh 519 579 IPR002048 GO:0005509
Sto8g1161 604 ProSitePatterns EF-hand calcium-binding domain. 456 468 IPR018247 -
Sto8g1161 604 ProSiteProfiles EF-hand calcium-binding domain profile. 479 514 IPR002048 GO:0005509
Sto8g1161 604 MobiDBLite consensus disorder prediction 20 62 - -
Sto8g1161 604 CDD STKc_CAMK 141 399 - -
Sto8g1161 604 Gene3D Phosphorylase Kinase; domain 1 144 227 - -
Sto8g1161 604 ProSiteProfiles EF-hand calcium-binding domain profile. 443 478 IPR002048 GO:0005509
Sto8g1161 604 ProSitePatterns EF-hand calcium-binding domain. 492 504 IPR018247 -
Sto8g1161 604 Pfam Protein kinase domain 142 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1161 604 ProSiteProfiles EF-hand calcium-binding domain profile. 554 584 IPR002048 GO:0005509
Sto8g1161 604 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 82 589 - -
Sto8g1161 604 ProSiteProfiles EF-hand calcium-binding domain profile. 515 550 IPR002048 GO:0005509
Sto8g1161 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Sto8g1161 604 Gene3D - 425 583 - -
Sto8g1161 604 MobiDBLite consensus disorder prediction 20 113 - -
Sto8g1161 604 CDD EFh 448 507 IPR002048 GO:0005509
Sto8g1161 604 SUPERFAMILY Protein kinase-like (PK-like) 141 401 IPR011009 -
Sto8g1161 604 MobiDBLite consensus disorder prediction 65 113 - -
Sto8g1161 604 PANTHER SERINE/THREONINE-PROTEIN KINASE 82 589 - -
Sto8g1161 604 ProSitePatterns EF-hand calcium-binding domain. 528 540 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1161 Sto-Chr8 7360555 7363059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1161 1 598 EF-hand Containing Proteins AT3G10660 64.186 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto8g1161 Pkinase 4.7e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1161 K13412 - tcc:18598450 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2984 13 34697795 34701548 Sto8g1161 8 7360555 7363059 CCT