Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1128 CTGAAGCTTGTCTGCGCGCTCATTCTCTCGCTTGCTGCAGTGGGTTTTAGTGCCACAGACCCAAATGACGTTAAGATTCTCAACCAATTTAGGAAAGGGTTGGATAACCCGGAGGTTTTACCGTGGCCTGAAGATGGCGGAGATCCGTGTGGCATTCCCAATTGGAAGTACATCGTCTGCAAGGGGAACCGAGTTTCCCAGATTCAGGCTAAGAACTTGAGCTTGAGTGGTCCTCTGCCTCACAATTTCAACCAGCTCTCCATGCTTGAAAACATAGGTCTTCAGAACAATAGACTCAACGGGTCTTTACCATCTTTCAGTGGGTTATCCAAGTTGAAGTATGCATACTTGGATTACAATAACTTCGATTCCATTCCGGTTGATTTCTTTGACGGGCTTGTGAGTCTGGAAGCTTTGGCATTGGATTATAATAATCTCAATGCCAGTACTGGGTGGCAATTCCCTTCTCAGCTGCTGGGTTCAACACAATTAACTAATCTTTCCTGTACGAGCTGCAACTTGGCCGGTTCGTTGCCGAGTTTTCTGGGGAATTTGTCATCTCTGTCAGTCTTGAAATTTTCAGGCAACAATTTAACCGGTGAAATTCCGGCGACTTTTAACGGCACGATTTTGCAGGTTCTGTGGTTGAACAATCAGCAGGGTGGCGGTCTGACTGGTCCTATTGATGTCGTGGCAACTATGACTTCGCTTACGAGTCTGTGGCTTCACGGGAATCAGTTCACAGGAACTATTCCCAAGAATATTGGAGACTTGAGTTCTCTCAAGGATCTCAATCTCAATGGTAATGTGCTTGTTGGCCTAATCCCTGATGCTTtgggtaaaatggaactggacAGTCTTGATTTGAACAACAACCACCTAATGGGTCCGATCCCAAAGTTTGCAGCAACCAAAGTCACTTTTGATTGGAATTCATTTTGTCAATCCAAACCAGGGCTTCCCTGCGCTTTTGAGGTCATGGCACTCCTGGAATTTCTGGATGGGTTGAAATATCCTTTAAATTTGGTTGATTCTTGGAGTGGTAATGACCCATGTAACGGGCCATGGTTGGGACTGAAGTGTGATGCCACTGGAAAGGTGTCTATGATTAATTTGCCCAAATTTAATCTCAACGGTACTCTAAGTCCCTCAGTTGCAAACTTGGGTTCTCTTGTTGAGATCAAATTGGGGGGTAACAATCTGAATGGTCAAATACCTAGTAACTGGACTAGCTTGAGTTCTCTGACATTGTTGGATCTCAGTGGCAATAACATTTCCCCTCCACTACCACATTTTAGCAGCAAGTTGAAACTTATGACTGATGGGAACTCTCTATTAGATGGTAACGCAGAAGCCCCTTCATCAGGGAATTCCAAACCTTCACATGATACTCCATCATCCCCATCGACACACACAAGTCCCAATTCCAAGAACACTCCCACATCAAAAAATTCCAACAGGAAAATTTTGTTTGCAATTGTTGCTCCTGTTGCAGGTGTTGCAGCTGCAGCTTTTCTGCTCATTCCCCTGCTATATTGTtacaagaggagaaaagatGGCTTCCAGGCTCCAAGTTCACTAGTAATCCACCCTAGAGATCCACCAGATTCAGAAAATATGGTAAAGATTGCTGTTGCTAACAATACTTATGGAAGCATTTCCTCGTTAACGGGGAGTGGGTCCGGAAGTAGAAACAGCAGTGGAACTGGGGACTCTCATGTCCTTGAAGCTGGAAATCTTGTGATATCAATTCAAGTTCTTCGTAATGTGACCAATAGTTTTGCCCCAGAGAATGAGCTTGGCCGAGGTGGATTTGGGGTTGTATATAAGGGAGAACTGGATGATGGCACTAAAATAGCAGTAAAAAGAATGGAAGCTGGTATAATTAGTAGTAAAGCTTTGGATGAGTTCCAGTCTGAAATTGCCGTTCTATCGAAAGTTCGTCACCGTCATCTAGTGTCTCTCCTGGGTTATTCCATTGCTGGTAATGAGAGAATTCTAGTTTATGAGTATATGTCGCAAGGGGCTCTCAGTAAGCATCTTTTCCATTGGAAGAGCTTTAAATTGGAGCCCCTTTCTTGGAAGAGGAGGCTTAATATTGCCTTGGATGTTGCCAGAGGAATGGAGTATCTTCATAGTCTGGCCCACCAGAGCTTCATTCACAGAGATCTTAAGCCTTCTAATATTTTGCTTGGGGATGATTTTAGAGCAAAAGTCTCGGATTTTGGATTGGTAAAACTTGCTCCTGATGGTGAAAAATCTGTAGTAACCCGTCTTGCTGGAACCTTTGGATACTTGGCCCCAGAATATGCAGTGACAGGAAAAATCACAACTAAAGCAGATGTTTTTAGTTTTGGCGTTGTGCTAATGGAGCTGTTGACTGGACTGATGGCACTTGATGAGGATAGACCTGAGGAAAGCCAATACTTGGCAGCATGGTTCTGGCGTATTAAATCTGATAAGGAAAAACTTATGGCTGCCATTGATCCATCCCTTGATAAAAAGGAAGAAATTTTTGAGAGCATCTCTGTTATTGCGGAGCTAGCTGGGCACTGCACTGCAAGAGAACCAAACCAACGACCAGATATGGGCCACGCTGTGAATGTTCTATCTCCCCTTGTTGAAAAATGGAAACCTATTGATGATGACACTGAGGAGTATTCTGGGATTGATTATAGCCTTCCCCTTAATCAGATGGTAAAGGGCTGGCAAGAGGCAGAAGGGAAGGACTTGAGCTACATGGACCTGGAAGACAGTAAGAGTAGTATCCCTGCAAGGCCTACTGGATTTGCAGATTCTTTTACTTCTGCTGATGGTCGCTAA 2823 0.4357 LKLVCALILSLAAVGFSATDPNDVKILNQFRKGLDNPEVLPWPEDGGDPCGIPNWKYIVCKGNRVSQIQAKNLSLSGPLPHNFNQLSMLENIGLQNNRLNGSLPSFSGLSKLKYAYLDYNNFDSIPVDFFDGLVSLEALALDYNNLNASTGWQFPSQLLGSTQLTNLSCTSCNLAGSLPSFLGNLSSLSVLKFSGNNLTGEIPATFNGTILQVLWLNNQQGGGLTGPIDVVATMTSLTSLWLHGNQFTGTIPKNIGDLSSLKDLNLNGNVLVGLIPDALGKMELDSLDLNNNHLMGPIPKFAATKVTFDWNSFCQSKPGLPCAFEVMALLEFLDGLKYPLNLVDSWSGNDPCNGPWLGLKCDATGKVSMINLPKFNLNGTLSPSVANLGSLVEIKLGGNNLNGQIPSNWTSLSSLTLLDLSGNNISPPLPHFSSKLKLMTDGNSLLDGNAEAPSSGNSKPSHDTPSSPSTHTSPNSKNTPTSKNSNRKILFAIVAPVAGVAAAAFLLIPLLYCYKRRKDGFQAPSSLVIHPRDPPDSENMVKIAVANNTYGSISSLTGSGSGSRNSSGTGDSHVLEAGNLVISIQVLRNVTNSFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGIISSKALDEFQSEIAVLSKVRHRHLVSLLGYSIAGNERILVYEYMSQGALSKHLFHWKSFKLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKPSNILLGDDFRAKVSDFGLVKLAPDGEKSVVTRLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELLTGLMALDEDRPEESQYLAAWFWRIKSDKEKLMAAIDPSLDKKEEIFESISVIAELAGHCTAREPNQRPDMGHAVNVLSPLVEKWKPIDDDTEEYSGIDYSLPLNQMVKGWQEAEGKDLSYMDLEDSKSSIPARPTGFADSFTSADGR 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1128 940 SUPERFAMILY L domain-like 325 437 - -
Sto8g1128 940 SUPERFAMILY Protein kinase-like (PK-like) 571 877 IPR011009 -
Sto8g1128 940 Gene3D Transferase(Phosphotransferase) domain 1 672 890 - -
Sto8g1128 940 CDD STKc_IRAK 600 873 - -
Sto8g1128 940 MobiDBLite consensus disorder prediction 447 483 - -
Sto8g1128 940 Pfam Leucine rich repeat 236 294 IPR001611 GO:0005515
Sto8g1128 940 Pfam Leucine rich repeat 89 146 IPR001611 GO:0005515
Sto8g1128 940 SUPERFAMILY L domain-like 18 301 - -
Sto8g1128 940 MobiDBLite consensus disorder prediction 918 940 - -
Sto8g1128 940 ProSitePatterns Protein kinases ATP-binding region signature. 600 622 IPR017441 GO:0005524
Sto8g1128 940 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Sto8g1128 940 Pfam Leucine rich repeat N-terminal domain 326 362 IPR013210 -
Sto8g1128 940 ProSiteProfiles Protein kinase domain profile. 594 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1128 940 Gene3D Phosphorylase Kinase; domain 1 559 671 - -
Sto8g1128 940 SMART serkin_6 594 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1128 940 PANTHER OSJNBA0070M12.3 PROTEIN 3 940 - -
Sto8g1128 940 Gene3D Ribonuclease Inhibitor 20 319 IPR032675 -
Sto8g1128 940 ProSitePatterns Serine/Threonine protein kinases active-site signature. 719 731 IPR008271 GO:0004672|GO:0006468
Sto8g1128 940 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 3 940 - -
Sto8g1128 940 Gene3D Ribonuclease Inhibitor 324 449 IPR032675 -
Sto8g1128 940 SMART LRR_typ_2 412 436 IPR003591 -
Sto8g1128 940 SMART LRR_typ_2 185 208 IPR003591 -
Sto8g1128 940 SMART LRR_typ_2 234 257 IPR003591 -
Sto8g1128 940 SMART LRR_typ_2 109 132 IPR003591 -
Sto8g1128 940 SMART LRR_typ_2 133 161 IPR003591 -
Sto8g1128 940 SMART LRR_typ_2 258 281 IPR003591 -
Sto8g1128 940 MobiDBLite consensus disorder prediction 443 483 - -
Sto8g1128 940 Pfam Protein tyrosine and serine/threonine kinase 597 868 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1128 Sto-Chr8 7148407 7151783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1128 74 907 Receptor kinase-like Gene Family AT1G55610 30.512 1.81e-83 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Sto8g1128 PK_Tyr_Ser-Thr 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1128 - - gmx:100305366 1384.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1128 8 7148407 7151783 Sto13g3002 13 34854978 34858372 CCT
Sto8g1128 8 7148407 7151783 Sto8g1128 8 7148407 7151783 ECH