Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1111 ATGTCTACCTCCAGAAGAAAGTTTGTTTTAAACACCGTGTCAGTTAATCTTGGGTGCAGCAGCTGCAAGAGGCCAAAGATTTCTCACTTTTTCCATCCAAAGCCCAAGCCCAAACTCACCTCCCAAACACCCCAACTTCCCAATCATTCTTCTTCCACTTCCAGCATCTGGGACAAAGACGACGCCGCCACTACCACTACCATTACCACTAGCAACACCGCCGCCACATTATCTCCCTACGGTGACAATTACGCGACGGTGAGAGGTTTGGGCAGAGTGGGAGGCGAAGGCGTGGCCGTTGAGAAGGATTCGGAGGACCCTTATTTGGATTTTAGGCATTCAATGATTCAAATGATAATGGAGAACGAGATATACTCGAAAGATGAACTGAGAGAGCTTCTGAGTTGTTTTCTTGAGCTGAATTCGCCGTACCACCATGGGGTTATAGTCAGAGCTTTCACTGAGATCTGGAATgctctgctctctctctctctcaagtcCAATTCCCCCAGTTCTCATATTTACTGTAATGCATGCATTGAATACAAGTATAACAAGGCTCCAGGCTTGCTACTCTatatgttttaa 588 0.4371 MSTSRRKFVLNTVSVNLGCSSCKRPKISHFFHPKPKPKLTSQTPQLPNHSSSTSSIWDKDDAATTTTITTSNTAATLSPYGDNYATVRGLGRVGGEGVAVEKDSEDPYLDFRHSMIQMIMENEIYSKDELRELLSCFLELNSPYHHGVIVRAFTEIWNALLSLSLKSNSPSSHIYCNACIEYKYNKAPGLLLYMF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1111 195 MobiDBLite consensus disorder prediction 32 58 - -
Sto8g1111 195 Pfam Transcriptional repressor, ovate 104 160 IPR006458 -
Sto8g1111 195 ProSiteProfiles OVATE domain profile. 100 159 IPR006458 -
Sto8g1111 195 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 98 161 IPR006458 -
Sto8g1111 195 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 171 IPR038933 GO:0045892
Sto8g1111 195 MobiDBLite consensus disorder prediction 38 58 - -
Sto8g1111 195 PANTHER TRANSCRIPTION REPRESSOR OFP6-LIKE 1 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1111 Sto-Chr8 7035892 7036993 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Sto8g1111 Ovate 3.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1111 - - mtr:MTR_7g105790 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1111 8 7035892 7036993 Sto8g1111 8 7035892 7036993 ECH