Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1106 ATGGGACGCGTCCGCACCAAGACTGTGAAGAAATCTTCACGCCAAGTGATAGAGAGGTATTACTCTCGAATGACTCTGGATTTCCACACCAACAAGAAAATCCTGGAGGAGGTGGCCCTCATTCCCTCCAAGAGACTCCGCAATAAGATCGCAGGCTTTTCCACCCACCTCATGAAGAGGATCCAGAAGGGTCCTGTTCGCGGCATCTCCCTCAAGCTCCAGGAGGAGGAGCGTGAGCGCAGAATGGATTTCGTTCCCGATGTTTCCGCCATTAAAACTGAGCAAATTGAGGTGGACAAGGAGACTCTTGACATGCTCAGCGCCCTTGGAATGAGCGAGATTCCCGGCCTTATTCAAGTTGATCCTGTTCCTGTTCAGCCGGCGCTTGGATTCGGTCGTGGTGGTTTTGGTGGAGCCGGTAGGAGGTTCTGA 432 0.5278 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDKETLDMLSALGMSEIPGLIQVDPVPVQPALGFGRGGFGGAGRRF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1106 143 Pfam Ribosomal S17 1 118 IPR001210 GO:0003735|GO:0005840|GO:0006412
Sto8g1106 143 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Sto8g1106 143 PANTHER 40S RIBOSOMAL PROTEIN S17 1 143 - -
Sto8g1106 143 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Sto8g1106 143 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Sto8g1106 143 PANTHER 40S RIBOSOMAL PROTEIN S17 1 143 IPR001210 GO:0003735|GO:0005840|GO:0006412
Sto8g1106 143 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1106 Sto-Chr8 6991685 6992116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1106 1 134 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 82.222 6.99e-77 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1106 K02962 - gmx:100819067 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1106 8 6991685 6992116 Sto8g1106 8 6991685 6992116 ECH