Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1097 ATGGCGGCGATTGCAAGGGTCATAGGGACCAATTCTGCTTTGCGTCGCTCTTCTCTTCTTTCCCcttctcttctcacttttcGCAGAGGAATCGCTTACAAGCTTTTCGTTGGAGGACTGTCATTTTTCACCACAGAGAAAGGATTGTCAGAAGCATTTTCTGAGTATGGTCAAGTCATGGAAGCTAAAATTGTGATGAACAAGGTGTCGGACAGATCGAAAGGGTTCGGGTTTGTCACCTTTGCTTCAGAGGATGAGGCTGAGAATGCCATTACAGGGATGAACGGAAAGGCACTAAATGGACGTGTTATCTTCATCGATTACGCGAAACCCAAATCCAATATTGGTGATGGAATGCCAATTGCTAGAGGACCTCCTGAACCAAAAGCAGACAACTAA 399 0.4361 MAAIARVIGTNSALRRSSLLSPSLLTFRRGIAYKLFVGGLSFFTTEKGLSEAFSEYGQVMEAKIVMNKVSDRSKGFGFVTFASEDEAENAITGMNGKALNGRVIFIDYAKPKSNIGDGMPIARGPPEPKADN 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1097 132 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 33 111 IPR000504 GO:0003723
Sto8g1097 132 SMART rrm1_1 34 107 IPR000504 GO:0003723
Sto8g1097 132 SUPERFAMILY RNA-binding domain, RBD 33 124 IPR035979 GO:0003676
Sto8g1097 132 Gene3D - 26 115 IPR012677 -
Sto8g1097 132 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL-LIKE 1 131 - -
Sto8g1097 132 PANTHER TRANSFORMER-2-RELATED 1 131 - -
Sto8g1097 132 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 104 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1097 Sto-Chr8 6906836 6908493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1097 35 113 Eukaryotic Initiation Factors Gene Family AT2G23350 32.911 1.80e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1097 - - qsu:111996796 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1097 8 6906836 6908493 Sto8g1097 8 6906836 6908493 ECH