Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1093 ATGGAAAATATGCCACCGGGATACCGTTTCTACCCAACTGAGGAGGAGCTGATTTCCTTCTATCTCCATAATAAGCTGGAAGGAGAAAGGGAGGACATGAACCGGGTAATACCGGTTGTCGATATATATGATTACAGTCCATGGCAACTCCCACAAATATCGGGAGAGGCGAGTGTGAGAGACGAGGAGCAATGGTTCTTCTTCATTCCAAGGCAAGAGAGCGAAGCTCGTGGAGGAAGGCCGAAGCGTCTCACTACAACTGGCTACTGGAAGGCGACCGGGTCTCCTAACCACGTTTATTCTTCTGATAATCACACAATTGGGATGAAAAGAACCATGGTTTTCTATAATGGAAGAGCTCCCAACGGTGAGAAAACCGAGTGGAAGATGAACGAGTATAAGGCAATTATTCAACCCcaaccatcttcttcttcttcaactaCCTCCAGGCCACTTCCCATGTTAAGGCAGGAATACAGTTTGTGCAGAGTGTACAAGAAATCAAAGTGCTTGCGGGCATTTGATAGACGGCCACCACCGAGGAGGGAAACTGGAGGCAGTAATAAGAAGaatatgaatataattattccAGAAAAGGGTGAGAATAAAGATAAGGCTTCGGCTTCAACATCGTCAACATCAATTGCAATGTCAAGGACGTCGTCGTATGGTCAGAGTGAGAGGGTGGAGATGAGTAGAGGAAGCTCAGGGGAGATGAGTTGGTCGTCAGGAGAGGAAGGGCAAGCTCGGatggagttggaggaggagccctTGTTGGATTGGGAGCAAGTTGATTGGTTTCTTGGCACCACTAATAAACCATGA 825 0.4388 MENMPPGYRFYPTEEELISFYLHNKLEGEREDMNRVIPVVDIYDYSPWQLPQISGEASVRDEEQWFFFIPRQESEARGGRPKRLTTTGYWKATGSPNHVYSSDNHTIGMKRTMVFYNGRAPNGEKTEWKMNEYKAIIQPQPSSSSSTTSRPLPMLRQEYSLCRVYKKSKCLRAFDRRPPPRRETGGSNKKNMNIIIPEKGENKDKASASTSSTSIAMSRTSSYGQSERVEMSRGSSGEMSWSSGEEGQARMELEEEPLLDWEQVDWFLGTTNKP 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1093 274 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 266 - -
Sto8g1093 274 MobiDBLite consensus disorder prediction 173 251 - -
Sto8g1093 274 ProSiteProfiles NAC domain profile. 4 167 IPR003441 GO:0003677|GO:0006355
Sto8g1093 274 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Sto8g1093 274 SUPERFAMILY NAC domain 2 167 IPR036093 GO:0003677|GO:0006355
Sto8g1093 274 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 266 - -
Sto8g1093 274 MobiDBLite consensus disorder prediction 206 243 - -
Sto8g1093 274 Gene3D NAC domain 13 171 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1093 Sto-Chr8 6863613 6864629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1093 7 266 NAC Transcription Factor Family AT5G22380 47.744 5.68e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto8g1093 NAM 1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1093 - - gmx:100800056 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1093 8 6863613 6864629 Sto8g1093 8 6863613 6864629 ECH