Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1077 ATGGATACATCAAATCCTGCAGTTTTTGTCAATGCAGAGTTGCTGCGCTTATATGTTGGACGGAGGGTTCGTGCTGTTATGCAGGTTATACGATCTGATGCTGGAGCTGTAATTGGAAAATCAACTGATGAGAAGCAGATAGTTGTGAAGGGATTGCCCCCACCGGGTCCTCTCACAAATTTTGTTGAAGTTATTGGTATAGCTGACAGTGATAAATCCATTCATGCTGAGATATGGACCAATTTTGGTGATTCAATTGATACCTTCAGTTACAATAAGCTTTGTCAGCTTGCAAATGGAGAATTTAAACCCTTATTCCTGTGA 324 0.4074 MDTSNPAVFVNAELLRLYVGRRVRAVMQVIRSDAGAVIGKSTDEKQIVVKGLPPPGPLTNFVEVIGIADSDKSIHAEIWTNFGDSIDTFSYNKLCQLANGEFKPLFL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1077 107 CDD RPA3 6 106 - -
Sto8g1077 107 SUPERFAMILY Nucleic acid-binding proteins 6 106 IPR012340 -
Sto8g1077 107 Pfam Replication factor A protein 3 1 101 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Sto8g1077 107 Gene3D - 1 107 IPR012340 -
Sto8g1077 107 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 107 - -
Sto8g1077 107 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1077 Sto-Chr8 6780454 6781882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1077 1 107 Core DNA Replication Machinery Family AT4G18590 68.224 3.78e-52 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1077 K10740 - vvi:100264936 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1077 8 6780454 6781882 Sto8g1077 8 6780454 6781882 ECH