Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1065 atggtgGGAGGGGAGGGTGATGAGATGAATTCGCAAATGGGGGAAGTGGAATCGGCATTCCAAACGACGGATCAAAGCTCGAAAAGCAATCAAATATTGTCAAATTTAGGAAGACAATCGTCAATATATTCACTCACTCTTGACGAGTTCCAACACACGCTATGCGAGGGAGGCAAGAATTTCGGGTCCATGAACATGGACGAGTTTCTCACCAGCATTTGGAGCGCCGAGGAAAACCAAGCCAATATTGTTAGCAACAACAACAACGTTAACAATAATAACGTGTGTCTGAACGAAGCCTCAGCCGACAAAATTAGGAAGCAGCCAAGCCTGAATCGTCAAGGCTCTCTCACTCTTACAATTCCCCCACCTCTCTCCAGAAAGACTGTGGACCAAGTTTGGTCTGAGATACATAGACAACACCACCACACTACCCACTctcacaacaacaacaaccaccTTAACGATGATGCTGCCACCGCTAATCTTCACAATTCCAACTCTGCCCCTCGCCAGCCCACTTTCGGTGAGATGACACTTGAGGATTTCTTGGTTAAGGCAGGGGTAGTTAGGGAATCATTTACTGCCCCTCCTGCCCACTCGCAGTATGGGATGTACACTAATAACAAATCCACGATGGGCCCAACTTTTGTTGGTAGGCCCGTCGTTGGGAATGTGGTTCCGCCTTATCAGGCGGCCCAGGGAGGAGAAGCGTCTGGGAAGAGGGATGTTATTGCCGGCTCTGGGTATCCTCCTCCGGCGGCGCCGGGGGTTTGCTACGGAGGGAGGGTGGTGAACGGAGGGGGTGGGTATGGGGCGACGCCGACGATGGGAATAGGTGGGCCGGTGAGCCCAGTGTCGTCGGATGGGCTAGGAGCGAGTGAGAATTCAGGAGGGCAATATGGGATGGAAATGGGAGTGTTGAGAGGGAGAAAGAGGATAATAGATGGTCCAGTGGAGAAGGTTGTGGAGAGAAGGCAGAGGAGGATGATCAAGAATAGAGAATCAGCGGCCAGATCTAGAGCCAGAAAACAGGCATACACTGTTGAATTGGAAGCTGAACTGAACCAATTAAGAGAAGAGAACGCACAGCTTAAACATGCGCTGTGTTTCGAGGAAATGAACAACAACATGAGGTTTCAAACCAAAGCTCAAAAGGCAAAAGAGAAATTGAGAGCTTTGAGAAGGAACCTTAGTTGTCCTCTCTGA 1209 0.4872 MVGGEGDEMNSQMGEVESAFQTTDQSSKSNQILSNLGRQSSIYSLTLDEFQHTLCEGGKNFGSMNMDEFLTSIWSAEENQANIVSNNNNVNNNNVCLNEASADKIRKQPSLNRQGSLTLTIPPPLSRKTVDQVWSEIHRQHHHTTHSHNNNNHLNDDAATANLHNSNSAPRQPTFGEMTLEDFLVKAGVVRESFTAPPAHSQYGMYTNNKSTMGPTFVGRPVVGNVVPPYQAAQGGEASGKRDVIAGSGYPPPAAPGVCYGGRVVNGGGGYGATPTMGIGGPVSPVSSDGLGASENSGGQYGMEMGVLRGRKRIIDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENAQLKHALCFEEMNNNMRFQTKAQKAKEKLRALRRNLSCPL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1065 402 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 328 343 IPR004827 GO:0003700|GO:0006355
Sto8g1065 402 Coils Coil 377 397 - -
Sto8g1065 402 CDD bZIP_plant_BZIP46 325 367 - -
Sto8g1065 402 Pfam bZIP transcription factor 325 369 IPR004827 GO:0003700|GO:0006355
Sto8g1065 402 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 211 401 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Sto8g1065 402 PANTHER ABA RESPONSE ELEMENT-BINDING FACTOR 12 200 IPR029803 GO:0003700|GO:0005634|GO:0009737|GO:0045893
Sto8g1065 402 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 323 366 IPR004827 GO:0003700|GO:0006355
Sto8g1065 402 SMART brlzneu 321 384 IPR004827 GO:0003700|GO:0006355
Sto8g1065 402 Gene3D - 323 377 - -
Sto8g1065 402 Coils Coil 341 368 - -
Sto8g1065 402 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 211 401 IPR043452 GO:0003700|GO:0045893
Sto8g1065 402 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 12 200 IPR043452 GO:0003700|GO:0045893
Sto8g1065 402 MobiDBLite consensus disorder prediction 139 160 - -
Sto8g1065 402 SUPERFAMILY Leucine zipper domain 325 369 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1065 Sto-Chr8 6727781 6729594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1065 30 395 bZIP Transcription Factor Family AT2G36270 49.758 1.10e-102 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto8g1065 bZIP_1 1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1065 K14432 - gmx:100790948 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1065 8 6727781 6729594 Sto13g3076 13 35294620 35295991 CCT
Sto8g1065 8 6727781 6729594 Sto8g1065 8 6727781 6729594 ECH