Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1048 CTGTCTTCATCTTCCATCTCTCAAGCTCTTGAACCCTTCCCATCGCCGATCATCAACGCCACCGTCGCTCAACGTCACCGACGCACCTCCTACTGCCGGTCATCAACGCCGCTGCACCTCCTACTGCCGGTCATCAACGCCGCTGCACCTGCCGCACGTCGTTCATCGTCAATCACCGTTATCGCGGTTACTTTGATGGATGCACAAATCTCAACTAGTTCAAATTTGTTAGACAACAAAATTTCAGCTGAACCCTCATTCGAAAATGAAGTCACGGAATCAGATTTAACTCCATATGTTGGCATGGAATTTGAGACTGAAGAACATGCATATAGATTTTATAATGCATATGCTGGCTTCATTGGATTTAGCGTTAGAAAGCATTGGACAAATAAAAGTAGGTTGGATCAAATTACAATATTATCTCAAAAATTTGTATGTTTCAAAGAAGGGTTCAAGAAGAAACGTGATTGTGAAGCAAAGAGAGTTCATAAAGATATCAGAACCGGATGTTTGGCTCAAATGATCGTTGGTCGACAACCAAATGGAAAATATGTGGTTACATATTTTGAGAAGCAACATAATCATGCTTTGGCCACCCCTAGAAGCAGACACAAATTACCATCACAGAGAAAACTTTCTGCTGCTCAGGCCACTCAAATTGAATTGGCAAATCAGTCTGGCATtcgacaaaaattaatttttgaattcatGAGTCGACAGGTTGGAGGACGAGAGAATGTTGGATGTACTCTTAAGGATTCAAGACAGTCTGAGAACCCATCATTTTTTTATGACATTCAACTTGATGCTGAAGATCAAATCACAAATATTTTTTGGGCAGATGCAGAGATGGTTGTAGATTATGTTTGTTTCGGAGATGTGGTATCTTTTGATACTACTTATCGTACCAACAAAAATCGTCGACCCTTTGCACCCTTTGTTGGATTTAATCACCATCGACAAACTGTCATATTTGGTGCAGCACTATTGTATGATGAAACTGCCGAATCATTTGAATGGTTGTTCAAGACTTTTCTTAAGGCCATGTGTGGGAAGAAGCCAAAAACAATTTTTACAAATCAAGATGCTGCAATGGCAAAAGCAATTTCAATGGTTTTACCTGATTCTTATCATCGCTTATGCACTTGGCATTTATTTCAAAATGCTCTCAAGAATGTCAATCATGCCTTTAAGAAGTCAGATTCTTTCGCTTCAGACTTGAGATGTTGTATTTATGACTACGAGTATGAAGATGAATTTTTGAATGCTTGGGAGTCAATACTTGATAAGCACGACCTTCGTCAAAATAAGTGGATGCAAGATTTatttcaaaagaaagaaaaacgggCTTCAGTGTATGGGCGACATACTTTTTCAGCAGGTGCTACATCAACACAACTAAGTGAAAGTTTCAATGGTCGACTAAGAGGTTACATGAAATCTACATTCAATGTATTtgatttctttaagaattttgaAAGGTTGTTAGAGGATATGAGATATAAGGAGATAGATGCTAAGTATGACATGAGTCAAAAAATGCCACCATTGAATTTAGATATCCTTTTACTTAAGAGTGCAAGAAATATCTACACACCAACAATCTATCATCAAGTTTTGGAGGAATATGAGAAGTCTTGTAACATGATTTTCAAGGAATATAATCAAGTTTCAACATTGTTTGGGTATAAAGTGTGCCTATTGGATCATCCGAGAGAGCACAATGTTACTTTTAACTCAGAAGATGAGTCAGTTGTGTGTAGCtgcaaaaaaattgaatttattggAATCTTGTGTGGCCATGCTCTTCACGTGCTTCATCATTGGaataaaatagttattcctGAAAAATACATTCTCAAGAGGTGGACCAAAAATGCTCGAAGTGGATGTGTTATGGATAACAATGGACGCATAATTAAGGAAGATCCTAATTTGGCTGTCTCGAATCGTTTTAAAGACTTGTCTCGAAATGCAGTTCAGATAGCAAGTAAAGCTGCTAAATCTGATGATGCTTCAaggtttttttccaaaaaattgGTTGAATTAAGTAtggaaattgataaaatttttacTTCAGTTTATTCTAGTGATCATCATGAACAAGGGGAAGAGACCAAtgcaattgaaaaaaatgtcaTACAAGTCAAGGGAATGAAGAAAAAGGATGGGTTGTCTCGTGTTAAAGGTCGACCAAAAAGTTGTGTTGAAAAGCCAAAAAAGAAACGCTGCTCACAAGTGTTAACTCCTTCAAGTGAACTTGTTTACCATGTCCCTACTTCAGCTGTAGTTTTACAGTTTGCTGCTTTAACTGCAATGCTAAAACAAACTTCAGAATGCATACCATTGGTTATAAGAGTCAGAAAGGAGCTGCAAACATTGAATAGCGAGAATGAATCGGGTCTACCCGCGATGACGGTGACTGACGATGAACGACGTGCGGCAGGTGCAGCGGCGTTGATGACCGGCGATTTGTCTCTTGCCGCCTCTGCGTTTGTGCCCCTTGGAGCTCTCTCCCGTGCTCCCCCGCAAACAGTCATCTACGGCAAGTCGACCTTACCGTCGCTTCTGCGTCTCGTTCCTTCCTTGGTGGCTCTTTATGATATTCACCCGAAAGCCAAATGA 2628 0.3782 LSSSSISQALEPFPSPIINATVAQRHRRTSYCRSSTPLHLLLPVINAAAPAARRSSSITVIAVTLMDAQISTSSNLLDNKISAEPSFENEVTESDLTPYVGMEFETEEHAYRFYNAYAGFIGFSVRKHWTNKSRLDQITILSQKFVCFKEGFKKKRDCEAKRVHKDIRTGCLAQMIVGRQPNGKYVVTYFEKQHNHALATPRSRHKLPSQRKLSAAQATQIELANQSGIRQKLIFEFMSRQVGGRENVGCTLKDSRQSENPSFFYDIQLDAEDQITNIFWADAEMVVDYVCFGDVVSFDTTYRTNKNRRPFAPFVGFNHHRQTVIFGAALLYDETAESFEWLFKTFLKAMCGKKPKTIFTNQDAAMAKAISMVLPDSYHRLCTWHLFQNALKNVNHAFKKSDSFASDLRCCIYDYEYEDEFLNAWESILDKHDLRQNKWMQDLFQKKEKRASVYGRHTFSAGATSTQLSESFNGRLRGYMKSTFNVFDFFKNFERLLEDMRYKEIDAKYDMSQKMPPLNLDILLLKSARNIYTPTIYHQVLEEYEKSCNMIFKEYNQVSTLFGYKVCLLDHPREHNVTFNSEDESVVCSCKKIEFIGILCGHALHVLHHWNKIVIPEKYILKRWTKNARSGCVMDNNGRIIKEDPNLAVSNRFKDLSRNAVQIASKAAKSDDASRFFSKKLVELSMEIDKIFTSVYSSDHHEQGEETNAIEKNVIQVKGMKKKDGLSRVKGRPKSCVEKPKKKRCSQVLTPSSELVYHVPTSAVVLQFAALTAMLKQTSECIPLVIRVRKELQTLNSENESGLPAMTVTDDERRAAGAAALMTGDLSLAASAFVPLGALSRAPPQTVIYGKSTLPSLLRLVPSLVALYDIHPKAK 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1048 875 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 70 724 - -
Sto8g1048 875 Pfam FAR1 DNA-binding domain 112 199 IPR004330 -
Sto8g1048 875 ProSiteProfiles Zinc finger SWIM-type profile. 575 611 IPR007527 GO:0008270
Sto8g1048 875 Pfam MULE transposase domain 295 389 IPR018289 -
Sto8g1048 875 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 70 724 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1048 Sto-Chr8 6615608 6621453 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto8g1048 MULE 9.3e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1048 K17604 - qsu:112016759 810.831