Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1043 ATGAAGATTATCGCAGCTTATTTGCTGGCCGTGTTGGGAGGCAACACTTCCCCTTCCGCCGATGATATCAAGAACATCCTTGGCTCAGTTGGAGCAGAAGCAGATGATGATAAAATTGAACTTCTTTTGTCTGAATTGAAGGGTAAAGATATAACGGAGGTTATTGCCAGTGGCAGGGAAAAGTTGGCCTCAGTGccttgtggtggtggtggtgctgTTGCTGTGGCTGCTGCTCCTGGAGGAGGTGGTGCTGCCGCTGCTCCAGCTGCAACTGAGGCCAAGAAAGAGGAAAAAGTGGAGGAGAAAGAGGAATCTGACGATGATATGGGCTTCAGTCTCTTTGATTAA 348 0.4483 MKIIAAYLLAVLGGNTSPSADDIKNILGSVGAEADDDKIELLLSELKGKDITEVIASGREKLASVPCGGGGAVAVAAAPGGGGAAAAPAATEAKKEEKVEEKEESDDDMGFSLFD 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1043 115 Pfam 60s Acidic ribosomal protein 17 114 - -
Sto8g1043 115 MobiDBLite consensus disorder prediction 79 115 - -
Sto8g1043 115 Gene3D - 1 59 IPR038716 -
Sto8g1043 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 115 - -
Sto8g1043 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Sto8g1043 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Sto8g1043 115 CDD Ribosomal_P2 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1043 Sto-Chr8 6583430 6585105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1043 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 64.348 6.59e-33 109