Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1040 ATGGGTTCGTTCTCTGGCACTTGTGAAATAATTGAAGCAAGGGAAGAGCTAAATACAGGGAAAACGACAGGGGTTTATCAGCTCAGTTCTGCATTTAGCGTGGCCGAGAAAAATCAGAAGCATTCTATGCTGAAATTAGGATACAAACATAATCTAGACAATGAGATTAATAAGTTGTTTGAATCAATTCATCTTAAAACTTCATCAAGGGATTTGGGCATTTCACAAAATGGTTCAAGCCAGAAGATGAAAAATGCATCAAAAAAGCCAATCACAGTTTCTCACTCCCCGCGGGTCGGGACATCTGAGCCTTTGAGTTTAAAGCAGGCATTAAAAGACCTACGCATATCTAAGGCTTCAGAAATGGCGGCTATGAAACGATTATCAATGTTGGCACCTTCTCCAAGAGTATCAGAGGTTGGTAGGATAAAGACTATGTACAATTCAGTTGTAGCTGAAACCAGTCAACCAGGACCTTCTTTTATTGAGAACGAGGAGAACAGAATTGAAACATCTGTAGTACCAAAAGAAAGCAAATCATCGCCCATGGAGAAAGCAATCCAATATCATCAAACTGCTAAAATAACATCATCATTGATACCAACTGTTCGTTCTTCTTCCTCGACTGTAATTGCAACTACACAAAATGATACTGGTACTACACTGGTGCAACTGCAAAGTGATTTGGTATGTTCATCAAGTAAAGTTGGGGTTCAGTCACAGAAATCAGAGCCTGGTCAAACGGAAAGGCAGACATCTCTACCTTCTCCAATTCTTTCTAACAGTAATAAAAGCAAATCAGAGTTTCCTAAAAATGCTTCTGCCTCTACAAAATTAGGAAATAAAGCATTTGTGCCAAAAACCAGACGGAAAGGCAGGGGTGTGGTATTGGTCACTAGGAACAAGAACTTAAGTAAGAAGAAACTAAAGCAGGACTCAGGTTCAACTATAAGTGCTCCAACATCCAAGGAAATGAATAATAAGTTGGTCCCAGGTTCAAATCAACTTTGTGAGAGATGTCGCTGTGCTTTAGCGAATACTAGCCAAGTAAACAGCCAAAACTCTATTGTATCAGAATCTACCATTCCTGGAGATGGAGTCAGCTTGAGTAATGTACACTCTGGTCCAAATAAGCCCACTTCATCATCAAGTAGTTGTAATATAAGCAGATCAGTTCCAAAAGTGAAAAAGAATGCCAGGTTGAAAGAACAACTTGAATTTTCACAAAGTTCTAAGAGTAGCCGAGGTGAGTACAGTAGTAGTACATGTACCAGTGACGAGAGCAATGCGAGTGGGTCTAGTTGTGGCATTAGACCTCACATGTCTAAGGATGTTAGGTGGGAAGCCATACGTCATGCTCAAATGCAGCATGGAGTCTTGGGTTTGAGACACTTCAATCTTTTAAAGAAACTTGGCTGTGGAGACATTGGGACTGTGTATCTTGCCGAACTAGTTGGCACAAATTGCTTGTTTGCTATTAAGGTCATGGACAATGAATTTTTGgcaagaaggaagaagatgccTAGGGCTCAaacagaaagagaaatattaaggATCCTGGATCATCCTTTTCTTCCAACAATGTATGCTCAATTTACGTCAGATAACCTGTCATGTTTGGTCATGGAGTACTGTCCAGGTGGAGATCTTCATGTCCTACGGCAGAAGCAGCTTGGTAGAAGTTTTTCTGAGAAAGCAGCAAGGTTTTATGTTGCTGAAGTCCTTCTAGCTTTGGAGTACTTGCACATGCTTGGAATTGTTTACCGTGATTTGAAACCTGAAAACATTCTTGTTAGAGAAGATGGACACATTATGCTCACAGATTTTGACTTGTCATTAAGGTGCGTTGTTAGGCCAATGCTTTTAAAATCGTCTTTTGATGTGGATCCGGCAAAAATTTCTGGTCCTCGTGCACAATCTAGCTGCATTGAGCCTTTCTGCATTGAACCATCCTGTCAAGTTCCATGCTTCAGCCCTAGAATCATACCTGATGCTGCGAAGGCAAGGAAATTAAAAGCCGATCTTCGTGATCAGATCAGATCATTGCCACAGCTTGTGGCGGAGCCTACTGATGCAAGATCAAATTCTTTTGTTGGTACTCATGAATACTTAGCGCCTGAGATCATCAAAGGAGAGGGACATGGAGCTGCAGTTGATTGGTGGACATTTGGTGTTTTTCTTTATGAACTTTTATATGGTAGAACCCCCTTTAAAGGTTCTAATAATGAAGAAACACTAGCCAATGTGGTGTTGCAAAGTCTCAGATTCCCTGACATCCCATTTGTTAGTTTCCAAGCCAGGGATCTCATAAGAGGGTTGTTGGTTAAAGAGCCTGAAAATCGTTTAGGTTCACTGAAAGGAGCTGCTGAGATCAAACAGCATTCCTTCTTTGAAGGCCTTAATTGGGCATTAATCCGATGTGCTATCCCGCCGGAGCTTCCAGAGTTTTGTGATTTTGGAGTTTCAGACATAACCTCACAGGGCAAGGGCAAGTATTTCGAGTGTAAAGCGGCAGGAGAGCACGTGGAATTTGAGTTGTTTTAA 2544 0.4053 MGSFSGTCEIIEAREELNTGKTTGVYQLSSAFSVAEKNQKHSMLKLGYKHNLDNEINKLFESIHLKTSSRDLGISQNGSSQKMKNASKKPITVSHSPRVGTSEPLSLKQALKDLRISKASEMAAMKRLSMLAPSPRVSEVGRIKTMYNSVVAETSQPGPSFIENEENRIETSVVPKESKSSPMEKAIQYHQTAKITSSLIPTVRSSSSTVIATTQNDTGTTLVQLQSDLVCSSSKVGVQSQKSEPGQTERQTSLPSPILSNSNKSKSEFPKNASASTKLGNKAFVPKTRRKGRGVVLVTRNKNLSKKKLKQDSGSTISAPTSKEMNNKLVPGSNQLCERCRCALANTSQVNSQNSIVSESTIPGDGVSLSNVHSGPNKPTSSSSSCNISRSVPKVKKNARLKEQLEFSQSSKSSRGEYSSSTCTSDESNASGSSCGIRPHMSKDVRWEAIRHAQMQHGVLGLRHFNLLKKLGCGDIGTVYLAELVGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRILDHPFLPTMYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEKAARFYVAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLTDFDLSLRCVVRPMLLKSSFDVDPAKISGPRAQSSCIEPFCIEPSCQVPCFSPRIIPDAAKARKLKADLRDQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLRFPDIPFVSFQARDLIRGLLVKEPENRLGSLKGAAEIKQHSFFEGLNWALIRCAIPPELPEFCDFGVSDITSQGKGKYFECKAAGEHVEFELF 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1040 847 MobiDBLite consensus disorder prediction 236 281 - -
Sto8g1040 847 MobiDBLite consensus disorder prediction 71 102 - -
Sto8g1040 847 MobiDBLite consensus disorder prediction 367 392 - -
Sto8g1040 847 Pfam Protein kinase domain 466 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1040 847 Pfam Protein kinase domain 694 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1040 847 Gene3D Phosphorylase Kinase; domain 1 465 548 - -
Sto8g1040 847 CDD STKc_phototropin_like 463 815 - -
Sto8g1040 847 MobiDBLite consensus disorder prediction 367 437 - -
Sto8g1040 847 MobiDBLite consensus disorder prediction 404 436 - -
Sto8g1040 847 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 847 - -
Sto8g1040 847 SMART serkin_6 465 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1040 847 Gene3D Transferase(Phosphotransferase) domain 1 549 806 - -
Sto8g1040 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Sto8g1040 847 SUPERFAMILY Protein kinase-like (PK-like) 440 815 IPR011009 -
Sto8g1040 847 MobiDBLite consensus disorder prediction 310 328 - -
Sto8g1040 847 PANTHER FLIPPASE KINASE 1-RELATED 1 847 - -
Sto8g1040 847 ProSiteProfiles Protein kinase domain profile. 465 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1040 847 MobiDBLite consensus disorder prediction 236 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1040 Sto-Chr8 6555367 6558426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1040 1 847 AGC Kinase Gene Family AT2G36350 50.524 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sto8g1040 Pkinase 4.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1040 - K08286 gmx:100792120 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1040 8 6555367 6558426 Sto8g2542 8 17692331 17696470 ECH
Sto8g1040 8 6555367 6558426 Sto8g1040 8 6555367 6558426 ECH