Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1037 atggACTTTCATCTGAAGCAATGGAGAAACCAGGGTGAGTCAGAAGAACAACATTCCGCAAAGATCCCAAAACTTGTGCTTGATGAACACCATTCCTCTCCCTCTCCCACCACTGCTCTTCCTTTCTTTGTACCTGAGCTCAACACCAAACTCACATCGCTCTCTTCATTTTCTGACTCCCCATTAACTGCTTCAAGATTTCCCAGGATGGGAAGTTATTTCAGCTTGGGTCAGTGGCAAGAACTGGAGTTGCAGGCTTTGATATTCAGGTACATGTTGGCGGGCGCTACTGTTCCTCCTGAGCTTCTTCTTCCAATTAAGAAAAGCCTTCTTCATTCTTCTCCATATTTCCCCTATTATCAGCCTCCATGGTATTGGGGAGGAGCTGCCATGGATCCAGAGCCCGGCCGGTGTCGGAGGACCGACGGCAAGAAATGGCGGTGCTCGAGGGACGTCGTGGCCGGCCAGAAGTACTGCGAGCGCCACATGCATCGCGGTCGGAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCCACCACCGCCGGAGGCGGAGGAGAAGGTGGGTGTCTTGGTGCTGTAACTACCTCCATATCTGCGCCACATATGGCATCGGCAACGTTGAAATCCCGTTTCGATGTCCTTCACCTTAATCAACGTCCATCTGGGACCAACAAGGATGAAAGCAAAAGGGTGTTTGAAAACCGAGACGTGGATGGTGAAGGTAGATCACATGGCCATATTCTGCGACATTTTTTCGATGATTGGCCACGATCACTTCAGGAGCCTGACAATGGGGAAAGCAATGGTAGCTCCTCCATCAACTCGGCCACTTGCCTCTCTATTTCAATGCcaggaaataataataaagcttCCTCGTCGGATGTGTCACTGAAATTGTCCACTGGCGATGATGATACAGAGAATCATCCTTGTCCTAGAAGTGGGAATGTGGACCCACACCACTTGCACTTGAACTGGACAGGAGGAGGATGGACTTCTTCGGCTAATCAAGTGGCTTCAATGGGAGGACCACTTGCAGAGGCTCTCAGGGCTagataa 1062 0.4953 MDFHLKQWRNQGESEEQHSAKIPKLVLDEHHSSPSPTTALPFFVPELNTKLTSLSSFSDSPLTASRFPRMGSYFSLGQWQELELQALIFRYMLAGATVPPELLLPIKKSLLHSSPYFPYYQPPWYWGGAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPTTAGGGGEGGCLGAVTTSISAPHMASATLKSRFDVLHLNQRPSGTNKDESKRVFENRDVDGEGRSHGHILRHFFDDWPRSLQEPDNGESNGSSSINSATCLSISMPGNNNKASSSDVSLKLSTGDDDTENHPCPRSGNVDPHHLHLNWTGGGWTSSANQVASMGGPLAEALRAR 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1037 353 MobiDBLite consensus disorder prediction 166 188 - -
Sto8g1037 353 PANTHER GROWTH-REGULATING FACTOR 3 9 349 - -
Sto8g1037 353 Pfam WRC 133 175 IPR014977 -
Sto8g1037 353 MobiDBLite consensus disorder prediction 1 20 - -
Sto8g1037 353 MobiDBLite consensus disorder prediction 301 317 - -
Sto8g1037 353 PANTHER - 9 349 IPR031137 GO:0005634|GO:0006351|GO:0032502
Sto8g1037 353 MobiDBLite consensus disorder prediction 259 318 - -
Sto8g1037 353 SMART QLQ_2 72 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto8g1037 353 ProSiteProfiles WRC domain profile. 132 176 IPR014977 -
Sto8g1037 353 MobiDBLite consensus disorder prediction 262 300 - -
Sto8g1037 353 Pfam QLQ 74 106 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sto8g1037 353 ProSiteProfiles QLQ domain profile. 73 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1037 Sto-Chr8 6517784 6519907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1037 1 352 GRF Transcription Factor Family AT3G52910 48.549 3.22e-89 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Sto8g1037 WRC 2.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1037 - - aip:107648821 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1037 8 6517784 6519907 Sto13g3101 13 35407415 35409380 CCT
Sto8g1037 8 6517784 6519907 Sto8g1037 8 6517784 6519907 ECH