Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1035 ATGATGGCTCACAAGCACTTGCACGAGCTACTCAAGGAAGATCAAGAACCATTCCTTCTACACAAATACATTTCCGATAGGCGGAGGCAGCTCAAAACGCCTTCTTCTACCACCACCCTTCAACTCAacaaaccaaaaccaaaaccaaaaccaatcTACCCTAACTTCCCTCCTCATCTCTGTAAGAACGTTTGCTTTTTCTCCTTTCCCAACTCCACCCCTGACCTCTTCAACTCTCCTCTCTTCGAATTCGCATCCCctcccaatcccaaaaccccctCCAAACCCATCTTCCTCCACATCCCTGCTCCAACtgcctctcttcttctccaagCCGCTCTTAGGATTCACAagcactcttcttcttcttcctccaaacCCAAATCCAATGCCTTTGGTTTGTTCGGCTCATTCTTCAAGAGACTAACGCAACGAAACCGAAAACGGGAAATTCAAGGGGATGCAACCAGGAATGATCAGCAACACCAAATTCTGTCTGAGAAATACAACGGACGGCCTAGCAGTGCCGTTTGGTCCGAGACCAATGAGGATAAATCTCTGGACACGGAAACTTCCACTAGTAGCTTCTGCCTCTCTGATGAATCCTACAACATTGACTTTTTGTCCAAATTCAAACACCTTACAGATTGCGCTTCCTGTTCTGATCACGACAACTTCTGCCAAAGCCCTTTCCGTTTTGTTTTACAGACGAGCCCCTCCTCCGGCCGCCGCACGCCGGGATTAGCGTCGCCGGATTCCTCGCCGGCTCGCCACAGAACAGAGTATCCTGAGCCAACAAATTTGGCCGGAATGTTGGTGTTGATTGACAAGAATACCCTGTCAAAGATGGACAAAACAGAGAGTGTGGAGAAATTCGAAGCAGGGGAAGAAGAGAAGGACCAGTTCAGCCCAGTATCTGTTTTAGACCCTCCCTTCGGGGACGACGAAGATGGCCATGAAAACGACGATGAAGATGGTGGTTTTGATTTGGAGTGCAGCTATGCCTTTGTACAGAGAACAAAGCAGAAGCTGTTACACAAGCTCCGTAGTTTTGAGAAACTTGCAGAGTTGGATCCAATTGAACTTGAGAAAAGAATGTTAGACCAAGGAGATGATGAAACATCAGATAATGAGAATGAGTTGAGGGGGTTAGTGTCACAAAAGCTCAAGAGACTGGTGTCAGATCTGATTgtggaggaagagagagaagtgAAATGCTTAGAAGACAGGGAAATGGTGATAAGAAGGGTTCGTGAGAGGCTTGAATTGTGGAAAGAAGTAGAGTGTAATACCATTGATATGATGATAGAACAAGACTTTTGTAGAGAGGAAGGGAAatggaagaaaaatgaagagcaCATAAAGGAGGTGGCAGGGGAGGTTGAGGTTGCCATTTTTGGGCTTCTAATGGAAGAATTTTCAGAGGAGCTAGATAAAGAAGGGTCAAAGTTCAATTACGGGTTAACCGACCCACGAGTGGGATCCGCACGTGTCGGATTGATGTTGACTCTAAtGAAAGTAGTGGgagaatatacatataatatagaattaatggaggagaagaagaagagaagaggaggaaggaAGAAGTTCCAGGAGACACGACACCCAATATACAAGGGGGTTCGGGAGAGGAAGGGGAAGTGGGTGTGCGAAGTTAGACAACCCAACAATAACAAAACTCGAGTGTGGCTGGGAACATTCTCAAACCCAGAGATGGCAGGCATAGCGTACGATGTAGCTGCTCTAGCTTTCAAGGGAGACCATGCTTCCTTAAACTTCCCGGACGCAGCCACCTTCTTGCCTCGCCTTAATTCCCACACATCCTCCATCAGAGCCATTCAGCTTGCAGCCATGGAAGCAGCAAACAACTACTTTTCCACTACTACAACTTCTACTTCTACTCATCAACTCATCATCAACAAACACAATAATAACATACTTAATAATGGTGGCGGGGGCACTCATCATTCCATTAAATCATcatcagaggaggaggaggaagagggtgCATTACTAGTAGAATTATTAGAAGATGCAGGTGGTGGGGAATCAAGTAGGAGTTTGTATTGGGATGAGGAAGAGGTGTTCAACATGCCAGGCCTTATTAACAGCATGGCAGAAGGCTTGATCATCACACCCCCCGCCTTGAAGACAGGCTTCAATTGGCTTGATATGGAAACTATCACCGACTTGACTCTCTGGCCAGactcttaa 2217 0.4168 MMAHKHLHELLKEDQEPFLLHKYISDRRRQLKTPSSTTTLQLNKPKPKPKPIYPNFPPHLCKNVCFFSFPNSTPDLFNSPLFEFASPPNPKTPSKPIFLHIPAPTASLLLQAALRIHKHSSSSSSKPKSNAFGLFGSFFKRLTQRNRKREIQGDATRNDQQHQILSEKYNGRPSSAVWSETNEDKSLDTETSTSSFCLSDESYNIDFLSKFKHLTDCASCSDHDNFCQSPFRFVLQTSPSSGRRTPGLASPDSSPARHRTEYPEPTNLAGMLVLIDKNTLSKMDKTESVEKFEAGEEEKDQFSPVSVLDPPFGDDEDGHENDDEDGGFDLECSYAFVQRTKQKLLHKLRSFEKLAELDPIELEKRMLDQGDDETSDNENELRGLVSQKLKRLVSDLIVEEEREVKCLEDREMVIRRVRERLELWKEVECNTIDMMIEQDFCREEGKWKKNEEHIKEVAGEVEVAIFGLLMEEFSEELDKEGSKFNYGLTDPRVGSARVGLMLTLMKVVGEYTYNIELMEEKKKRRGGRKKFQETRHPIYKGVRERKGKWVCEVRQPNNNKTRVWLGTFSNPEMAGIAYDVAALAFKGDHASLNFPDAATFLPRLNSHTSSIRAIQLAAMEAANNYFSTTTTSTSTHQLIINKHNNNILNNGGGGTHHSIKSSSEEEEEEGALLVELLEDAGGGESSRSLYWDEEEVFNMPGLINSMAEGLIITPPALKTGFNWLDMETITDLTLWPDS 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1035 738 Pfam AP2 domain 537 587 IPR001471 GO:0003700|GO:0006355
Sto8g1035 738 MobiDBLite consensus disorder prediction 146 190 - -
Sto8g1035 738 Gene3D AP2/ERF domain 538 596 IPR036955 GO:0003700|GO:0006355
Sto8g1035 738 MobiDBLite consensus disorder prediction 237 263 - -
Sto8g1035 738 PANTHER OS04G0572500 PROTEIN 1 479 - -
Sto8g1035 738 Coils Coil 390 410 - -
Sto8g1035 738 MobiDBLite consensus disorder prediction 290 325 - -
Sto8g1035 738 SMART rav1_2 538 601 IPR001471 GO:0003700|GO:0006355
Sto8g1035 738 MobiDBLite consensus disorder prediction 30 51 - -
Sto8g1035 738 CDD AP2 537 597 IPR001471 GO:0003700|GO:0006355
Sto8g1035 738 PRINTS Ethylene responsive element binding protein signature 539 550 IPR001471 GO:0003700|GO:0006355
Sto8g1035 738 PRINTS Ethylene responsive element binding protein signature 577 597 IPR001471 GO:0003700|GO:0006355
Sto8g1035 738 MobiDBLite consensus disorder prediction 649 670 - -
Sto8g1035 738 MobiDBLite consensus disorder prediction 157 190 - -
Sto8g1035 738 ProSiteProfiles AP2/ERF domain profile. 538 595 IPR001471 GO:0003700|GO:0006355
Sto8g1035 738 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1B-LIKE PROTEIN 1 479 - -
Sto8g1035 738 MobiDBLite consensus disorder prediction 30 44 - -
Sto8g1035 738 SUPERFAMILY DNA-binding domain 538 596 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1035 Sto-Chr8 6491444 6497740 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1035 5 477 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 33.200 1.19e-47 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sto8g1035 AP2 3.2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1035 - - zju:107434963 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1035 8 6491444 6497740 Sto8g1035 8 6491444 6497740 ECH