Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1029 ATGGAAATGGAGGATCATCACAATCACAATCAGAATCAGCACTATGGCATGCCCGATCTCAGGCAGCTGATGAGGTCGACGCCCCCCCATTTCCCCTCCATGGGAGCGCAGGCGGATGTGTTCCAGCCTCACCCCAATCTCACACACTACGACATCATGATGTTGGGTCGTCATCACAGCCTTCAGGAGTTTGGCTCCGATTCCCCCACCACCACTGTCCCCACTACTACTCCACCCACCGCCACCGCTTCCACTCCTCCTCTCACTGCCTTAGACGCTGCAGACACTCACACTACTCCACCCTGCCTCGCCGGGGATCCCTCCACCGCTAGATGGCCCAGGCAGGAAACCCTCACTCTTCTTGACATCAGATCTCGCCTTCACTCTAAATTCAAAGACGCCAATCAGAAGGGCCCCTTATGGGATGAAGTCTCTAGGATAATGTCGGAAGAACATGGATACCAAAGGAGTGGGAAAAAATGCAGGGAGAAATTCGAGAACTTGTACAAATATTACAAGAAGACCAAGGAAGGGAAAGCGGGGAGACAGGACGGCAAACACTACAGGTTCTTCCGTCAATTGGAAGCCTTATACGGAGGAAACAACACTACCACTAACCCAACCTCACCACTTCCACCTGAAACCAATTATGGTAGCACAAGCACCACTATGGGGTTTCATCACACTCACACTACTACACCATCCCAACCCAATCAAGACACTATCATGTTTCACAATCACATAATCAATGGCAAGCATTGCGAGAGCCTGAGCCTCACAAACTCCACGGAATTCGACACGTCATCGTCGGACGACGACAACAGCGGGGAGAACGAGTCCACGGAGAAGGGGATGATggggaggaggaagaggagtgGTTGGAAGGGGAAGATAAAAGAGTTCATGGACTCGCAGATGAGGAAGCTGATAGAGAAGCAAGAGGCGTGGTTGGATAGGCTGGTGAAGACGCTGGagcagaaggagaaggagagggcGTTGAGAGAGGAGGAGTGGAGAAGACAAGAGGCGGAGAGGTTGGAGAGAGAGCACAAGTTTTGGGCTAAAGAGAGAGCTTGGATTGAAGCCAGGGATGCGGCTTTGATGGATGCCTTACACAAATTAACAGGAGCAGATATCATAAAGcagcctcctcctcctcctcctcatcatcatcatgatgaagaagatgatgggaGTGAAAAACAAAATGAGAGTAGTGAGCGGTGGGACAAGTGTGAGATTACAAAGCTAGTGGAGTTGAGAGATGAAGTGGAGTCCGGGTTTGAGCAAAGTGGGTGTTCGGAGGAAGTCATGTGGGAGGAAGTAGCAAACAAAATGACTTGTTTTGGGTACCAAAGGACTGCCTCCATGTGCAAACACAAATGGGAAAGTGTGACAAGCAAGCAATTAGGAATGAATAACAAGAAGCGCAAGGAAAAGTCTAGAAGCTCCAATTTTAATTACTTGcacaataatattttgaatgaCCAAACATCCTTGTACACCCAAACCCAACCAACTGCTCATCCCTATTGTGATATCAACCAACAACGCCGCCTACAATTACAAACCAACGATGCCTCTTCTCCTTCGCCTTCCGATTCCAATGTTGGGAATGCGGTTCACGCTGACGTCAGCTGCTTTCCATTCTTTAATATTAGTGCCGAGGGAGAGAATTTGTGGGACAACTACGGCTTGAAGCTCAATAAGGCAAATCAAAACCACTGA 1728 0.4589 MEMEDHHNHNQNQHYGMPDLRQLMRSTPPHFPSMGAQADVFQPHPNLTHYDIMMLGRHHSLQEFGSDSPTTTVPTTTPPTATASTPPLTALDAADTHTTPPCLAGDPSTARWPRQETLTLLDIRSRLHSKFKDANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGGNNTTTNPTSPLPPETNYGSTSTTMGFHHTHTTTPSQPNQDTIMFHNHIINGKHCESLSLTNSTEFDTSSSDDDNSGENESTEKGMMGRRKRSGWKGKIKEFMDSQMRKLIEKQEAWLDRLVKTLEQKEKERALREEEWRRQEAERLEREHKFWAKERAWIEARDAALMDALHKLTGADIIKQPPPPPPHHHHDEEDDGSEKQNESSERWDKCEITKLVELRDEVESGFEQSGCSEEVMWEEVANKMTCFGYQRTASMCKHKWESVTSKQLGMNNKKRKEKSRSSNFNYLHNNILNDQTSLYTQTQPTAHPYCDINQQRRLQLQTNDASSPSPSDSNVGNAVHADVSCFPFFNISAEGENLWDNYGLKLNKANQNH 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1029 575 MobiDBLite consensus disorder prediction 385 408 - -
Sto8g1029 575 CDD GT1 407 480 - -
Sto8g1029 575 Coils Coil 310 349 - -
Sto8g1029 575 MobiDBLite consensus disorder prediction 262 293 - -
Sto8g1029 575 ProSiteProfiles Myb-like domain profile. 111 169 IPR001005 -
Sto8g1029 575 MobiDBLite consensus disorder prediction 62 87 - -
Sto8g1029 575 Gene3D - 112 174 - -
Sto8g1029 575 Gene3D - 409 468 - -
Sto8g1029 575 MobiDBLite consensus disorder prediction 63 87 - -
Sto8g1029 575 ProSiteProfiles Myb-like domain profile. 401 466 IPR001005 -
Sto8g1029 575 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 25 566 - -
Sto8g1029 575 PANTHER - 25 566 - -
Sto8g1029 575 Pfam Myb/SANT-like DNA-binding domain 111 197 IPR044822 -
Sto8g1029 575 Pfam Myb/SANT-like DNA-binding domain 407 490 IPR044822 -
Sto8g1029 575 MobiDBLite consensus disorder prediction 378 408 - -
Sto8g1029 575 CDD GT1 111 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1029 Sto-Chr8 6456583 6459291 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1029 10 570 Trihelix Transcription Factor Family AT5G03680 42.904 4.45e-134 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto8g1029 Myb_DNA-bind_4 1.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1029 - - gmx:100813245 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1029 8 6456583 6459291 Sto8g1029 8 6456583 6459291 ECH