Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1025 ATGGTGATGGACATGGATAGCTCACGTAGATCGTTCGATAGATCGAGAGAAGCGGGTATCAAGAAACCCCGATTGACAGACGAGCTCGAGCGGGGTTCAAATTCCAGTGTTCGACCTTTTCCTCAGCGACAAGTGGCGTCCGGGGTCAATACGTTGGCCTCAGCAAGGTTTAGGACAAACGACAGAGATTCGGAAAGCAGTGACTCTGGTCGCGTTGGATACCAGCCCCAACCGCTGCACCAAGAGCTTGTAACTCAGTATAAAACCGCGCTTGCTGAGCTCACTTTCAATTCTAAACCGATAATTACCAACTTGACTATAATTGCAGGCGAGAACCTTTATGCAGCAAAGGCAATCGCTGCCACTGTTTGTGCTAACATTCTAGAGGTGAACCCAGTTTACACTGTACAGCTGTTTCTCTGTCCAATTGCTGTAAAAGACAGATTGCACATAGGCCATAGCCAAGCTGTAGAGGCATGGAACTTGTATAACTTCAATTCTGTGCCAGTTTCGTGCTTTGCCTTATGGAGTGAATTAATGCATGTTCAGAAAGATAAAAGGTTTACATATTCATTTCCCTGTATCAGGATTGTGATTGCCATGCTCGTGGAGCTCAAAACTGTTTCCTTGTCTTCTAGATTGTTCATAAGTTTGAATGCACAGAATGATTGGAGGGGAAATTTGTCTCTTTGTAACAAGAAAAGAAGGGGTGAAAAGGTTCCTACTGAACAGAAGCTGCCATCTCTCTATCTTTTAGACAGTATTGTTAAGAATATTGGGCGGGACTATATAAAGTACTTTGCTGCTAAACTACCCGAGGTATTCTGCAAGGCATACAGACAGGTTGATCCATCTGTCCATTCAAGTATGAGGCATCTCTTTGGAACTTGGAAAGGAGTCTTTCCTCTTCAGACCCTCCAGATGATTGAGAAAGAACTTGGGTTCACCCCGGCTGTCAATGGTTCATCTTCTGCATCATCTACAATCAGGAGCGATTCTCAGTCACAACGACCTCAGCATAGTATCCACGTAAATCCTAAATATTTAGAGAGGCAGCGTCTTCAGCAGTCCAGCAGGACTAAAGGAATAGGTAATGATATGGCCGGAGCTATGGCAAACTCAACTGATGTTGCAGAAAGGCCAGATAGAGCATTGGGTTCTGCACGTCCATGGGTGGATTCCAGTGTTAATGTGCAAAACATTCAGCACTCTAATCGAGATGCATATAATGATTCTGTTCCTGACAAGGGCATTGGTGTAACCTATGGAGGCAACGAATATGGTTCTGATCTTTCAAGGAATTCAGGCTTGGGTATTGGAAGGACTGGTGGCAGAGTGTCTGAATTTGCACGTGACAGAGCTTGGTACAAAGCAGGTGGCAGTGCTGCTGAGATTATGTCTGGCCAAAGAAATGGGTTCAGTCTCAAGCGTGGTTTATCAAATCTTGAAGCACCAAAGTCTGAGCCAACACAAAGCTTAGCGGGTATAAAAAGTGGTGTGTTGTCAAGTAACTGGAAAAATTCTGAGGAAGAGGAGTTCATGTGGGATGAGATGAATGCTGGACTGACTGATCGTGGTGCTTCCAATGTTTCTAACAACTTGAGCAAAGACCAGTGGACTACGGATGATGATAATTTGGTAAGCTTGCAAAAATTGAACTTTGGAGTCGGAGTCTTCGTTCTTGGTATTAATTTGTCTGGGTGTTTATTCTTCCATTCTGGATTTCTTTACAGAGTTACTGATGCGTCAGATATTGCTGTTGGAGATGGAATGGCAGTTGAAGATCACCATCAAATCACGCACCATTTTGGGGCAAAGGTTGGTAGAGAAGTATCCACTGAAAAAAAACAGCTACCTGCTTTTTTACATCGGCCACCATTATCATGGCAATTGCAGGAGCAGCACTCATTTGATGAGCTGAATCGTAAGCCAAATCATTCTGAAGGCTTTGTATCTACTCTTGTTGGGTTACCAAACAGTGCGAATTCTTCAGCTGTCAAGATGGGAAATCGGCCCTTCTCGTCAAATGCGACAATAGGATCAATAGGAATGGTGCAACAACAGCAATTTCATTCTGTGGGAGCTGAGTCACCCTCTAGGCAGTCACCTTTGCGGCAACAGTCTCCATCTCCACCAGTTAATGTGCACCATTCTTCTCATCAATTGCAAAATTTGGCTGAGCAAGACCGTCCACAGACTCTTAAAATTTCTCAATTTTCAGGGGGTCTACGGAGCCAAGATATTCAAGATTCTTTGCCTGTCCTTTCACATAATGTTCAGGCTGGTAACTCACGAAGATTACAGCAAAAGGAGTTACAAGGTCCATTGTCTTCAGTGTCTACTTTTCAGCCAAGACACCGTAATGCAGCTTCACAGCAGCATCAACCTGGCTCCTCTAAGATTGAAGTCTCTGATATGGCTGAAAAGCCGCCCCACTCTAAATTTTCTGTAGCTGGAGAAACTTCAGAGCACTCTACTACAACAAGTAGTTTGTTAGCTGCAGTTATGAAGAGTGGAATTTTTTCCAACAATTCAATAACCAGTAGTCAGCCTATTACAAGTTCCATGGACAAAAAGAACCTGCCATTGAAATTAGGGGTTCAACCTAGTCGGCCAAGTGGATCGTCTCCTTTGACATCGATTTCTTCAGGGCCTGGGGTTgcatctccatctccatctccatctccatctccatTGGGTCCTTCTCCCAATGATGATGATTCATCTACTTTACCAAAAGTAGGAAAAGTTCGAACACCTCCAAAGGGGGCTCAATCTCCAGCTTCCTCTGCTCTGAGTAGTGCTTCAGCTAAGACTGTAAATGTCACCAATAACAGCCCTAATCCCGTTTCAAACCTTTTAAGCTCATTAGTTGCACAGGGTTTGATTTCTGCAAAAACAGAATCATCATCAAAGGTGCCGGCTGAGATGCTGACCCGTTTGGAAGACCAAAGTCAAAGCATTACCACCAGTAGTTCTTTGCCAGTTGCTTCAGTTTCTGGTTCTGCAGCTGTCCCGCTATCATCTACCAGAGATGATCAACCTGCAAAAAGCTCCGGTCAATCAACTTCTACAGAAATAAGAAATTTAATTGGCTTTGAGTTTAAGCCTAATGTGATCCGAGAATTGCATTTACCTGTGATCAGAGAACTACTGGACGATTTTCCACATCATTGCAGAAGTTGTGGCCTTAGGCTTAAACATCAAGAACAGTTTAATAGACACTTGGAGTGGCATGCTACTAGAGAGAAAGAGCAAAATGATCTAATTAAGGCCTCGAGAAGATGGTATTTAAAGTCTGGTGACTGGATTGTTGGCAAGGAAGAAGTTTCATCTGAATCTGATATTGATTCTGTAGAATCATGTGGCAAGGAATCTGACAAAAGTGAAATTGATGTTACGGTTCCATCGGATGAAGAGCAATGTTTGTGTGTGTTGTGTGGTGAGCTATTTGAAGAGGTTTACTGTCAAGAAAGAGATGAGTGGGCGTTCAAAGGGGCTGTTTACATCACTATCTCAGATAGTGATGGTGAGATGTGTATTGATGTCAGTACTGCTAAGGGTCCCATTGTTCATGCAAGATGCTTATCAGAGAATTGTATGATTAGTGCCAGTACAAAGATTGAATATGGCATGTATTGTTGCCCTGATGGGTAA 3657 0.4296 MVMDMDSSRRSFDRSREAGIKKPRLTDELERGSNSSVRPFPQRQVASGVNTLASARFRTNDRDSESSDSGRVGYQPQPLHQELVTQYKTALAELTFNSKPIITNLTIIAGENLYAAKAIAATVCANILEVNPVYTVQLFLCPIAVKDRLHIGHSQAVEAWNLYNFNSVPVSCFALWSELMHVQKDKRFTYSFPCIRIVIAMLVELKTVSLSSRLFISLNAQNDWRGNLSLCNKKRRGEKVPTEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDPSVHSSMRHLFGTWKGVFPLQTLQMIEKELGFTPAVNGSSSASSTIRSDSQSQRPQHSIHVNPKYLERQRLQQSSRTKGIGNDMAGAMANSTDVAERPDRALGSARPWVDSSVNVQNIQHSNRDAYNDSVPDKGIGVTYGGNEYGSDLSRNSGLGIGRTGGRVSEFARDRAWYKAGGSAAEIMSGQRNGFSLKRGLSNLEAPKSEPTQSLAGIKSGVLSSNWKNSEEEEFMWDEMNAGLTDRGASNVSNNLSKDQWTTDDDNLVSLQKLNFGVGVFVLGINLSGCLFFHSGFLYRVTDASDIAVGDGMAVEDHHQITHHFGAKVGREVSTEKKQLPAFLHRPPLSWQLQEQHSFDELNRKPNHSEGFVSTLVGLPNSANSSAVKMGNRPFSSNATIGSIGMVQQQQFHSVGAESPSRQSPLRQQSPSPPVNVHHSSHQLQNLAEQDRPQTLKISQFSGGLRSQDIQDSLPVLSHNVQAGNSRRLQQKELQGPLSSVSTFQPRHRNAASQQHQPGSSKIEVSDMAEKPPHSKFSVAGETSEHSTTTSSLLAAVMKSGIFSNNSITSSQPITSSMDKKNLPLKLGVQPSRPSGSSPLTSISSGPGVASPSPSPSPSPLGPSPNDDDSSTLPKVGKVRTPPKGAQSPASSALSSASAKTVNVTNNSPNPVSNLLSSLVAQGLISAKTESSSKVPAEMLTRLEDQSQSITTSSSLPVASVSGSAAVPLSSTRDDQPAKSSGQSTSTEIRNLIGFEFKPNVIRELHLPVIRELLDDFPHHCRSCGLRLKHQEQFNRHLEWHATREKEQNDLIKASRRWYLKSGDWIVGKEEVSSESDIDSVESCGKESDKSEIDVTVPSDEEQCLCVLCGELFEEVYCQERDEWAFKGAVYITISDSDGEMCIDVSTAKGPIVHARCLSENCMISASTKIEYGMYCCPDG 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1025 1218 MobiDBLite consensus disorder prediction 869 888 - -
Sto8g1025 1218 ProSiteProfiles CID domain profile. 79 317 IPR006569 -
Sto8g1025 1218 MobiDBLite consensus disorder prediction 1 75 - -
Sto8g1025 1218 Pfam CID domain 157 307 IPR006569 -
Sto8g1025 1218 SMART 558neu5 82 314 IPR006569 -
Sto8g1025 1218 MobiDBLite consensus disorder prediction 320 342 - -
Sto8g1025 1218 MobiDBLite consensus disorder prediction 862 944 - -
Sto8g1025 1218 MobiDBLite consensus disorder prediction 770 800 - -
Sto8g1025 1218 MobiDBLite consensus disorder prediction 320 367 - -
Sto8g1025 1218 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 588 1204 - -
Sto8g1025 1218 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 5 131 - -
Sto8g1025 1218 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 239 547 - -
Sto8g1025 1218 MobiDBLite consensus disorder prediction 923 944 - -
Sto8g1025 1218 MobiDBLite consensus disorder prediction 7 31 - -
Sto8g1025 1218 MobiDBLite consensus disorder prediction 770 823 - -
Sto8g1025 1218 CDD CID_Pcf11 84 306 - -
Sto8g1025 1218 MobiDBLite consensus disorder prediction 1004 1023 - -
Sto8g1025 1218 ProSitePatterns Zinc finger C2H2 type domain signature. 1059 1079 IPR013087 -
Sto8g1025 1218 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 588 1204 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Sto8g1025 1218 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 5 131 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Sto8g1025 1218 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 239 547 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Sto8g1025 1218 SUPERFAMILY ENTH/VHS domain 234 318 IPR008942 -
Sto8g1025 1218 Gene3D - 76 141 IPR008942 -
Sto8g1025 1218 Gene3D - 232 314 IPR008942 -
Sto8g1025 1218 SUPERFAMILY ENTH/VHS domain 81 136 IPR008942 -
Sto8g1025 1218 MobiDBLite consensus disorder prediction 32 57 - -
Sto8g1025 1218 MobiDBLite consensus disorder prediction 688 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1025 Sto-Chr8 6429259 6436010 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1025 239 522 C2H2 Transcription Factor Family AT4G04885 35.739 1.75e-37 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1025 K14400 - gmx:100811629 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1025 8 6429259 6436010 Sto8g1025 8 6429259 6436010 ECH