Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1023 ATGAACACGAGAGACGACGATCAAACAAAATCGAAGGGTAAAGCTCCTGCTGATATGTCTTCTTCCGGTCATTTGGAGCAGGGGACATGTGAGTTTTCTCCAATTGAATGGGGTTCTGACGCATTTACCTCAGGTGGTCTTTCCGTTGCGGACATTGGCCTTTCTAGGTCTATTTCTTCGTCTTTGTTCGATTCTCCTTTGATAGagtttgaagcattttcaaccATGAACCCGACGTCTCTGgattctcctcctcctcctcctctgccGGTTACGGCAATGTCTAGTGATGAGGGAGCTCCTTCGTTACCACTATTTACGGGGGAGGAGACCGGATTGATGAGAACAAGTAGTGAGTTGGAGGAAAGTGATGTGCCACAGCCGCTTGATTGTTTACAAGGGACTCCAATTCCGCCATTTCTATGGAAAACTTACGATCTGGTGGATGATTCATCGCTGGATCCGATCATATCGTGGGGCTCCACCGGTGAAAGTTTCGTGGTATGGGACCCTGTGGAGTTTGCAAGGATAATCTTGCCAAGGAATTTCAAGCATAACAATTTCTCCAGTTTTGTCCGCCAGCTAAATACTTATGTGGGTATTGCCGTATCACAGCCAGGAATGGCTGCTATTGAGAGATTGACAACTGAAGATATGTTCTGCCTGCTGAGTGGCTACTGTGGTGAGGATTTAATCTTCCGCAGGTTGCGTTCCAGTTATTACTCACAGATTGCATCCTCGACTATAGATCCATCTGCTCACGATGGCTTAAATTTTGGTGACTGGACATTCTTCTGTGGGTTCCGCAAGATTGACACTGATAAGTGGGAGTTTGCCAATGAAGGATTCAAACGGGGGAAAAGACATCTGTTGAAGAACATACAAAGGCGCAGGTCACTTCAATCCCAGCAAATTGGTACCTATATTGGGCCATCCGAAGCAGGAAAGTCTGAACTTGAGGTTGAGATAGAAAGACTGAGAAAAGAGAGAAGTATGCTCATGCAGGACGTGGTTGATTTGCAGCAACAACAGCGAAGGACTGTTCACCAAGCAGGAGAAGTGAACCAGAGGCTCCAGACTGCTGAGCAGAGACAGAAGCAAATGGTTTCTTTCTTGGCTAAGTTATTTCAAAACCCAGCCTTTTTAGCCCGCCTCAAGCAAAAGAAGGAACGGATAGATATAGATTCTCCAAGAGTGAGAAGAAAGTTTGTTAAGCAGCACCATGAAACAGGAACATCAGACTCTGTGAAGGAGGGGCAGATTGTAAAATACCAACCTGATTGGAGAAATATAACTAACCCTTCTGAAACATCGGTAATAAATCCATCTTCTATTGAACAGTCTTCTGACTACCTTTCACAAGGTATCCCAAGAGAACTGAGTTCAATTGCCGAAAATCTGACTTCGCAAGTTGAGAATGTAGCATCAGTTGAAATGACTGCAGTGCATGAGACTATGGCAACTCGAGAGATCATAGGAGAAGGATCATCAAGCACAGGACCTGAAGATCCCCGTTTCAAAGGTAAAAACGTCTTGAGCCTAGATCAAGAAGTTATCGCAGAGTATTTTGTCTCGTTTCCTGATGATTTGACCAGGGAGAAAAGCCTTTCAACATTTTACCCTTCTGAAACTGAAAGCATCATTAAAGAAGAAGATATATGGAACCCAGACTTCGATGTTAGCGGTGCTACTTCTAGCTCTGGGAATGAACTGTGGGGCAATCCAATCAATTATGAAGTGCCAGAATTTGGAGTGACAGGTGGCATGTCAGACATCTGGGATGTAAGCTACATGCCAGAAACAGGAAATTTGGGTATTGATAATTGGCCAACTGAGGAATTCTCTTTGAATGAAACAGAAACTCAGGCTGATCGCCCAAAAGATGATAGATCTAAGAACTAA 1902 0.4311 MNTRDDDQTKSKGKAPADMSSSGHLEQGTCEFSPIEWGSDAFTSGGLSVADIGLSRSISSSLFDSPLIEFEAFSTMNPTSLDSPPPPPLPVTAMSSDEGAPSLPLFTGEETGLMRTSSELEESDVPQPLDCLQGTPIPPFLWKTYDLVDDSSLDPIISWGSTGESFVVWDPVEFARIILPRNFKHNNFSSFVRQLNTYVGIAVSQPGMAAIERLTTEDMFCLLSGYCGEDLIFRRLRSSYYSQIASSTIDPSAHDGLNFGDWTFFCGFRKIDTDKWEFANEGFKRGKRHLLKNIQRRRSLQSQQIGTYIGPSEAGKSELEVEIERLRKERSMLMQDVVDLQQQQRRTVHQAGEVNQRLQTAEQRQKQMVSFLAKLFQNPAFLARLKQKKERIDIDSPRVRRKFVKQHHETGTSDSVKEGQIVKYQPDWRNITNPSETSVINPSSIEQSSDYLSQGIPRELSSIAENLTSQVENVASVEMTAVHETMATREIIGEGSSSTGPEDPRFKGKNVLSLDQEVIAEYFVSFPDDLTREKSLSTFYPSETESIIKEEDIWNPDFDVSGATSSSGNELWGNPINYEVPEFGVTGGMSDIWDVSYMPETGNLGIDNWPTEEFSLNETETQADRPKDDRSKN 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1023 633 MobiDBLite consensus disorder prediction 604 633 - -
Sto8g1023 633 PRINTS Heat shock factor (HSF) domain signature 140 163 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g1023 633 PRINTS Heat shock factor (HSF) domain signature 178 190 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g1023 633 PRINTS Heat shock factor (HSF) domain signature 191 203 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g1023 633 Coils Coil 316 343 - -
Sto8g1023 633 Gene3D - 133 298 IPR036388 -
Sto8g1023 633 Pfam HSF-type DNA-binding 140 297 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g1023 633 MobiDBLite consensus disorder prediction 1 31 - -
Sto8g1023 633 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-3 267 629 - -
Sto8g1023 633 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-3 120 200 - -
Sto8g1023 633 SUPERFAMILY "Winged helix" DNA-binding domain 136 204 IPR036390 -
Sto8g1023 633 SMART hsfneu3 136 297 IPR000232 GO:0003700|GO:0006355|GO:0043565
Sto8g1023 633 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 267 629 IPR027725 -
Sto8g1023 633 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 120 200 IPR027725 -
Sto8g1023 633 MobiDBLite consensus disorder prediction 618 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1023 Sto-Chr8 6418109 6420702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1023 267 611 HSF AT5G03720 37.569 3.90e-50 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Sto8g1023 HSF_DNA-bind 4.2e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1023 K09419 - gmx:100807323 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1023 8 6418109 6420702 Sto8g1023 8 6418109 6420702 ECH