Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1007 ATGGACGCCGCCACAACCATTCACCTTCAAACTCCTCTCATGGAAGAAAAGGACACCACCCTCTCCGGTTCACCCGGAATCATCTCACAACCGGGTTCACCCCCTAAACCGCTCTCAACCTCTCTGCCAATGAACAGTAGTAGCGCAGGGGCAATAGTAGCAGCAGCACCCCATACCCAAAGCTTTGATTTGTTGGggaaaaagaagagagggagGCCAAGAAAATATGACGCTGATGGCAACTTGAGGGTCCCTTCCACCACGACGTCGTATCCCCCTCCCCCTGGCTTCACTCTCTCCTCAACCGCACCCTCCAAAAAGCCTCGAGCCAGGAATCTTGCCTCTCCCAACTCCCACCTCCTCGTATCATTAGGAGGGTTTTTTGGAATCACGGCTGGTGGGGATTTTATACCTCACGTGCTCACTGTTCATGCGGGAGAGGTCCCAGAGGAGTGTGCATTCTTTCTGCCAATGGAGCTATCTCTAATGTTACCATGCGCCAACCTGGTTCTTCTGGGTCGATTTGAGATTTTATCCTTGAGTGGCTCATTCACACTCAACGACAATGGTAGTGGCATCAAGAGTCGCACTGGTGGCTTGAGTGTCTCACTTTCTGGCCCTGATGGTCGCGTCATAGGTGGTGGTGTCGCTGGTTTACTCGTAGCTGCTAGCCCAATCCAAATTGTAATGGGAAGCTTCATGCCGAATGGTGGTTATAGCTACAAGACACATAAAAAGAAGCAGCATCGTGAACACACGGTGGTGTCGCCTACTACTTCTGTGGCGGCACCAAGGCCTATCTCACAACCAAATCCTGAAGGAGACCAAAACTGTCTCACACCAACCATGCAGTTTCAAGAACAAAGCCAGAGAGAATCCGAGGATGTCACGAGTGATAAACACAACTCGGATGAGCATATGAACGATTCTGAACAATTTTCTGTTCAAACGCCTTACCCGGACATCAATATATCTTTGCCTGCCCAATAG 990 0.4939 MDAATTIHLQTPLMEEKDTTLSGSPGIISQPGSPPKPLSTSLPMNSSSAGAIVAAAPHTQSFDLLGKKKRGRPRKYDADGNLRVPSTTTSYPPPPGFTLSSTAPSKKPRARNLASPNSHLLVSLGGFFGITAGGDFIPHVLTVHAGEVPEECAFFLPMELSLMLPCANLVLLGRFEILSLSGSFTLNDNGSGIKSRTGGLSVSLSGPDGRVIGGGVAGLLVAASPIQIVMGSFMPNGGYSYKTHKKKQHREHTVVSPTTSVAAPRPISQPNPEGDQNCLTPTMQFQEQSQRESEDVTSDKHNSDEHMNDSEQFSVQTPYPDINISLPAQ 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1007 329 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 35 147 IPR039605 GO:0003680
Sto8g1007 329 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 173 328 IPR039605 GO:0003680
Sto8g1007 329 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 173 328 - -
Sto8g1007 329 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 35 147 - -
Sto8g1007 329 Gene3D - 153 253 - -
Sto8g1007 329 Pfam Plants and Prokaryotes Conserved (PCC) domain 170 233 IPR005175 -
Sto8g1007 329 CDD DUF296 173 233 IPR005175 -
Sto8g1007 329 MobiDBLite consensus disorder prediction 1 112 - -
Sto8g1007 329 MobiDBLite consensus disorder prediction 63 79 - -
Sto8g1007 329 MobiDBLite consensus disorder prediction 309 329 - -
Sto8g1007 329 MobiDBLite consensus disorder prediction 82 112 - -
Sto8g1007 329 MobiDBLite consensus disorder prediction 12 29 - -
Sto8g1007 329 MobiDBLite consensus disorder prediction 241 329 - -
Sto8g1007 329 MobiDBLite consensus disorder prediction 39 54 - -
Sto8g1007 329 MobiDBLite consensus disorder prediction 254 291 - -
Sto8g1007 329 SUPERFAMILY AF0104/ALDC/Ptd012-like 171 235 - -
Sto8g1007 329 MobiDBLite consensus disorder prediction 292 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1007 Sto-Chr8 6319578 6320976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1007 65 261 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 39.912 4.87e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1007 - - zju:107432136 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1007 8 6319578 6320976 Sto8g1007 8 6319578 6320976 ECH