Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1001 ATGCATAGGCATAACCTTACTACCTTACTGGTGGACACTCCACAGAAACAGAAGGCTGAGAAATTTGATGTGCATTATCTGTCCCACCCATGTGATATGGAATACCGCATTTTGTACTTGCTCCAAACCGACGCTCATGGCTATCTTCTCGCCAACTGGACAGGTCCTGACGCCTGTGTCGCCACGTGGCGCGGCGTTCGTTGCTCCTCCAGTGGCCAAGTtgtctctctctccctcccttCCCTCAATCTCCGAGGTCCAATCGACTCACTCTCATCGCTACTCCACCTCCGATTACTTGACCTCCATGATAATCGCTTAAACGGCAGCGTTGCGCCTCTTACCAACTGTACACGCCTCAGGCTCCTTTACCTCTCCGGCAACGACTTCTTCGGCGAGATTCCGCCGGAGATAGCTTCCCTCAAGCATCTATTAAGACTCGACCTCTCCGACAACAACATCCGCGGCTCCATCCCTAGAGAACTCTCCCAATTGACTCACCTCCTCACGCTTCGCCTACAGAACAACGTCCTCTCTGCTCAGATTCCAGATCTCTCCGTTTCGCTGGTTAATCTCACGGAGCTCAATTTGACCAACAACGAATTCTACGGACGCTTACCCGATGGAATGTTGAGGAAATTCAACGAAATAAGCTTCTCAGGGAACGAAGGTCTGTGCGGGTCACCTCCATTGCCGGTTTGTTCCTTCACAGAGGGTAATCCTCCTTCTTCGGCAACATCACCGACGCAGACGGTCCCTTCGAACCCTAGCTCGTTGCCTGAATCTCAAACAAGCGTAATTGCAAGGCCGAAAACGGAAATTCGAAAGGGGTTAAGCCCGGGAGCTATAGTGGCGATTGTGGTGGCGAATTGTGTAGCATTGCTGGTGGTAACCGCTTTCATTGTGGCTCATTGTTGTAACAGAGGACGAAGCCGGAATTCGATGGTGGGTAGCGAGAGCGGGAAGAGGAAAAGCGGGAGTAGTGGGTATGGAAGCGAGAAGAAAGGGTAtgggaataataataataataataataataataatagtgggGATAGTGATGGGACTAGTGGGACAGAACGAAGTAAGCTTGTGTTCTTCGAGAGGAGGAATCAGTTTGAGTTGGAGGAATTGCTGCGAGCATCGGCGGAGATGTTGGGGAAAGGTAGCTTGGGGACGGTGTATAAGGCGGTGCTGGATGATGGGTCCACGGTGGCGGTGAAGAGGCTCAAGGATGCAAACCCATGCGATAGGCATGAGTTCGAGCAGTACATGGATGTGATCGGGAAGGTGAAGCATCCAAATATTGTCAGATTCAGAGCCTATTACTACGCCAAAGAAGAAAAACTTCTTGTCTATGATTATCTCCCCAACGGAAGCTTGCATTCTCTTCTTCATGGGAACCGTGGGCCGGGAAGAATTCCATTGGATTGGACGACACGAATAAGCTTGGTGCTAGGAGCAGCGAGAGGGCTTGCTCGGATTCACTCAGAATACAGCGCAGCCAAAATACCTCACGGCAACGTCAAATCTTCGAACGTCCTTCTTGACAAGAATGGCCTTGCTTGCATCTCCGACTTCGGCTTATCCCTTCTCCTCAACCCTGTTCACGCCATCGCAAGACTCGGCGGATACAGAGCTCCAGAACAATCCCAAGTCAAGAGGCTGTCTCAGCAAGCAGACGTATACAGTTTCGGGGTCTTACTCTTGGAAGTTCTCACTGGAAGAGCTCCTTCTTCTCAATACCCCTCTCCCTCTGTTTCTCGCGTGGACGTGCAAGAGGAACAAGCACCGCTGGATCTTCCCAAATGGGTGCGATCAGTGGTGAAGGAAGAGTGGACAGCCGAAGTGTTTGATGAGGAGCTTCTGCGTTACAAGAACATCGAGGAAGAGCTTGTGTCCATGCTGCATGTGGGGTTGGCTTGTGTGGTTCCACAGGCAGACAAGAGGCCAACCATGGCGGAAGTTGCTAAGATGATTGAGGATATAAGGGTGGAGCAATCTCCAATAGGAGAGGACTATGATGAATCACGCAATTCACTTTCACCTTCACTTCCCACCACCGAGGATGGCCTTGCTTAA 2079 0.4974 MHRHNLTTLLVDTPQKQKAEKFDVHYLSHPCDMEYRILYLLQTDAHGYLLANWTGPDACVATWRGVRCSSSGQVVSLSLPSLNLRGPIDSLSSLLHLRLLDLHDNRLNGSVAPLTNCTRLRLLYLSGNDFFGEIPPEIASLKHLLRLDLSDNNIRGSIPRELSQLTHLLTLRLQNNVLSAQIPDLSVSLVNLTELNLTNNEFYGRLPDGMLRKFNEISFSGNEGLCGSPPLPVCSFTEGNPPSSATSPTQTVPSNPSSLPESQTSVIARPKTEIRKGLSPGAIVAIVVANCVALLVVTAFIVAHCCNRGRSRNSMVGSESGKRKSGSSGYGSEKKGYGNNNNNNNNNNSGDSDGTSGTERSKLVFFERRNQFELEELLRASAEMLGKGSLGTVYKAVLDDGSTVAVKRLKDANPCDRHEFEQYMDVIGKVKHPNIVRFRAYYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHSEYSAAKIPHGNVKSSNVLLDKNGLACISDFGLSLLLNPVHAIARLGGYRAPEQSQVKRLSQQADVYSFGVLLLEVLTGRAPSSQYPSPSVSRVDVQEEQAPLDLPKWVRSVVKEEWTAEVFDEELLRYKNIEEELVSMLHVGLACVVPQADKRPTMAEVAKMIEDIRVEQSPIGEDYDESRNSLSPSLPTTEDGLA 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1001 692 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Sto8g1001 692 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 39 683 - -
Sto8g1001 692 MobiDBLite consensus disorder prediction 237 265 - -
Sto8g1001 692 SUPERFAMILY Protein kinase-like (PK-like) 383 659 IPR011009 -
Sto8g1001 692 Gene3D Phosphorylase Kinase; domain 1 349 454 - -
Sto8g1001 692 Gene3D Transferase(Phosphotransferase) domain 1 455 680 - -
Sto8g1001 692 PANTHER LRR RECEPTOR-LIKE KINASE 39 683 - -
Sto8g1001 692 ProSiteProfiles Protein kinase domain profile. 379 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g1001 692 MobiDBLite consensus disorder prediction 666 692 - -
Sto8g1001 692 SUPERFAMILY L domain-like 46 231 - -
Sto8g1001 692 MobiDBLite consensus disorder prediction 311 358 - -
Sto8g1001 692 SMART LRR_typ_2 141 165 IPR003591 -
Sto8g1001 692 SMART LRR_typ_2 189 213 IPR003591 -
Sto8g1001 692 MobiDBLite consensus disorder prediction 236 265 - -
Sto8g1001 692 Gene3D Ribonuclease Inhibitor 34 242 IPR032675 -
Sto8g1001 692 Pfam Protein kinase domain 383 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1001 Sto-Chr8 6292987 6297773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1001 32 688 Receptor kinase-like Gene Family AT2G36570 67.267 0.0 876
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto8g1001 Pkinase 1.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1001 - - pper:18771548 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1001 8 6292987 6297773 Sto13g3124 13 35584049 35586196 CCT
Sto8g1001 8 6292987 6297773 Sto8g1001 8 6292987 6297773 ECH