Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g1000 ATGGCTTCCTGCGACGACGACGACTTCTCTCTCCTCGGTGACGACCATCATCAATCAAGCGCTGGtccccaccaccacctccaCCAGTCCTACGCGCCGCACTCCTTCTCAACCGCCGTCACACCTGTTCAGCCCGTCCAGTCGGAGCCGAACGACGCCGATGGCAGCGACAAGAGAAACGATCGGGAGGAGGTCGGCGATGGAACGACGTCGTACGGCTACAAAAGGCCCAAACTTTCAAGCGGCGGAGAGTACCGGAAGGACAGAGAGGAGTGGAGCGATGCGGCGATTGTGTGCCTCCTGGAGGCTTATACGGAGAAGTTCACTCAGTTGAATCGAGGGAATCTTAGAGGGAGGGATTGGGAGGAGGTTGCAGCTATAGTGAGTGAGCGGTGCGAGAATCAAACCAAGAGTGTGGAGCAATGCAAGAATAAAgttgataatttgaagaagAGGTACAAGTTGGAAAGACATAGGATGACTAATGGCTGTATTTCCGCCAGTCATTGGCCTTGGTTTAAGCAGATGGAACAGATCGTGGGCAATTCGCTCTCTACCAAGTATGCGCCGGATGAGGATAAAGGGATCGCTTCTGCTGGGAATTCTCCCAGGCAAACGAAGAGATATGGAGTGGCAATGGCCAGCAGTGGAGGTCAACTAATTAGCTTGAAGTCTAAACCAATGTCAAACCTTAGATGGCGGAGGGTAGTACTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGGTACCTGCAATATTGATCCAAAGGTGGCCATGTTAGTTTCAAAAGAAGTTGCAATAGCGTCTCGTCTTGGTGTGGAGGTGGCAATTGTTGTTGGTGGACGTAACTTTTTCTGTGGAGATGCCTGGGTAACTGCAACAGGTTTAGAAAGATGTACTGCATACCAAGTTGGTATGATGGCAACAGTCATGAATTCTATATTACTACAATCAACTCTAGAGAAGATGGATGTTCAAACTCGTGTACAAACTACCATTGCAATGCACGAGTTTGCTGAACCATATAATAGGCAGCGGGCCATCAGACATCTCGAGAAAGGCAGAGTTGTTATATTTGGTGGCATTGGTTTTGGCACTGGAAATCCACTCTTCTCAACTGATATAGCTGCAGCTCTTCGAGCTTCTGAGATAAATGCTGAGGCAGTTCTCAAGGGTACTAATGTAGATGGTGTATATGACTGCAACTCCCGAGACAGCAATTTCACTTTTGAGCACATATCCTTCAGGGACCTTGTTTCAAGAGGTGCCACCTctatggacatgtcagcactgACATTCTGCGAGGAAAATGCTATTCCTGTTGTGGTTTTTAATCTACTGGAGCCTGGGAACATCTCAAAAGCATTATGTGGAGAACAAGTTGGTACACTAATTGATCAAACTGGAGCAATAAGCTGA 1419 0.4602 MASCDDDDFSLLGDDHHQSSAGPHHHLHQSYAPHSFSTAVTPVQPVQSEPNDADGSDKRNDREEVGDGTTSYGYKRPKLSSGGEYRKDREEWSDAAIVCLLEAYTEKFTQLNRGNLRGRDWEEVAAIVSERCENQTKSVEQCKNKVDNLKKRYKLERHRMTNGCISASHWPWFKQMEQIVGNSLSTKYAPDEDKGIASAGNSPRQTKRYGVAMASSGGQLISLKSKPMSNLRWRRVVLKISGAALTGSGTCNIDPKVAMLVSKEVAIASRLGVEVAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMDVQTRVQTTIAMHEFAEPYNRQRAIRHLEKGRVVIFGGIGFGTGNPLFSTDIAAALRASEINAEAVLKGTNVDGVYDCNSRDSNFTFEHISFRDLVSRGATSMDMSALTFCEENAIPVVVFNLLEPGNISKALCGEQVGTLIDQTGAIS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g1000 472 PANTHER URIDYLATE KINASE 53 472 - -
Sto8g1000 472 MobiDBLite consensus disorder prediction 31 51 - -
Sto8g1000 472 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 53 472 IPR011817 GO:0006221|GO:0009041
Sto8g1000 472 CDD AAK_UMPK-PyrH-Ec 234 466 IPR015963 GO:0005737|GO:0006221|GO:0033862
Sto8g1000 472 Gene3D - 92 155 - -
Sto8g1000 472 MobiDBLite consensus disorder prediction 1 87 - -
Sto8g1000 472 Pfam Myb/SANT-like DNA-binding domain 89 179 IPR044822 -
Sto8g1000 472 Hamap Uridylate kinase [pyrH]. 231 466 IPR015963 GO:0005737|GO:0006221|GO:0033862
Sto8g1000 472 Pfam Amino acid kinase family 235 445 IPR001048 -
Sto8g1000 472 MobiDBLite consensus disorder prediction 52 69 - -
Sto8g1000 472 Gene3D - 224 471 IPR036393 -
Sto8g1000 472 Coils Coil 132 159 - -
Sto8g1000 472 SUPERFAMILY Carbamate kinase-like 232 465 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g1000 Sto-Chr8 6287767 6291906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g1000 66 197 Trihelix Transcription Factor Family AT3G14180 38.806 5.84e-18 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto8g1000 AA_kinase 6.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g1000 - - gmx:100805176 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1000 8 6287767 6291906 Sto8g1000 8 6287767 6291906 ECH