Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0997 ATGATGGAACCCAATGGACTTGGTGGTGGAATGTTTCCTGGCATGAGCTCCGGATTGCTTGGTGGAGTGGAAAATGTTCCTAATCCTCAGAATCAAAATCCTCACTCTATGCATCATCACCATCCCCAAATGGTTCCTTATGCTTCTTCTCATCTTGACACTGATATTCCTCAATCAATCAAACAGGTACAGGGGTACCCCTATTCGGCCAAGCCCAAGCAACAATCGACACTCAGTGATGAAGACGAGATGGGTGGATTTGCGGCAGATGACGTCAGCTCTGGGGATCCCAAGAGAGGGAAAATGTCACAGTGGCACAGAATGAAGTGGACGGACACTATGGTCAAGCTGCTAATAATGGCGGTTTTTTACATTGGCGACGAAGGTGGTTCAGAAGGGGGTGATAATAAGAAGAAGCCTATTATGGGGTTGTTGCAGCAGAAGAAAGGGAAATGGAAAGCGGTGTCACGAGCTATGATGGAGAAGGGGTTTTTCGTGTCTCCTCAGCAATGCGAGGATAAATTCAACGATTTGAACAAGAGGTACAAGAGAGTGAATGATATTCTGGGGAAAGGAACGGCTTGTCTTGTGGTGGAAAATAACAACTTGTTGGACACGATGGATTTGTCACCCAAGATGAAAGAGGAGGTTCGAAAATTGCTCAATTCTAAGCATCTTTTCTTCAAGGAAATGTGTGCTTACCATAACAGTTGTGGCCATGGGAGCACTAGTGGTGTGCCCCAACAATCCTCCGAGGTGGGAACAGAGCAACATCAGCAGCAAAAATGTTCTCACGCATCAGAAATTGGTGTGGCGAATTTGGGAAGATCATCAAGGAAAAGAGCAAAGAAGTCAGAGTTAATGCAGCAAATGAGCAGTGAGATGATGGGTGTACTTCAGGATGGGGGTAGAAACACATGGGAGAAGAGACAATGGATGAAAAGGAGACTAATACAATTGGAAGAGCAGCAGATAAGCTATCAGACACAAGCATTTGAACTGGAAAAGCAGAAGCTGAAATGGATGAGGTTTAGCAGAAAGAAGGAGAGGGAGATGGAGAGAGCCAAGCTTGAGAACGAACGAAGGCAGCTGGAAAATGAGAGGATGGCTTTGGTCATTAGGCAGAAGGAGATTGAGTTACTGAATCTTCAACATCACCAACAACAGCAACATTCTTCTAACTAG 1185 0.4523 MMEPNGLGGGMFPGMSSGLLGGVENVPNPQNQNPHSMHHHHPQMVPYASSHLDTDIPQSIKQVQGYPYSAKPKQQSTLSDEDEMGGFAADDVSSGDPKRGKMSQWHRMKWTDTMVKLLIMAVFYIGDEGGSEGGDNKKKPIMGLLQQKKGKWKAVSRAMMEKGFFVSPQQCEDKFNDLNKRYKRVNDILGKGTACLVVENNNLLDTMDLSPKMKEEVRKLLNSKHLFFKEMCAYHNSCGHGSTSGVPQQSSEVGTEQHQQQKCSHASEIGVANLGRSSRKRAKKSELMQQMSSEMMGVLQDGGRNTWEKRQWMKRRLIQLEEQQISYQTQAFELEKQKLKWMRFSRKKEREMERAKLENERRQLENERMALVIRQKEIELLNLQHHQQQQHSSN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0997 394 MobiDBLite consensus disorder prediction 239 286 - -
Sto8g0997 394 Coils Coil 345 374 - -
Sto8g0997 394 MobiDBLite consensus disorder prediction 1 41 - -
Sto8g0997 394 MobiDBLite consensus disorder prediction 62 104 - -
Sto8g0997 394 MobiDBLite consensus disorder prediction 239 267 - -
Sto8g0997 394 Coils Coil 317 337 - -
Sto8g0997 394 Gene3D - 110 184 - -
Sto8g0997 394 MobiDBLite consensus disorder prediction 23 38 - -
Sto8g0997 394 Pfam Myb/SANT-like DNA-binding domain 107 233 IPR044822 -
Sto8g0997 394 PANTHER F16F4.11 PROTEIN-RELATED 2 274 - -
Sto8g0997 394 PANTHER F16F4.11 PROTEIN-RELATED 280 393 - -
Sto8g0997 394 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 280 393 - -
Sto8g0997 394 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 2 274 - -
Sto8g0997 394 MobiDBLite consensus disorder prediction 62 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0997 Sto-Chr8 6271874 6273253 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto8g0997 Myb_DNA-bind_4 6.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0997 - - gmx:547619 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0997 8 6271874 6273253 Sto8g0997 8 6271874 6273253 ECH