Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0995 ATGGCATTGAAACTGAGGGGAAAAGTGAAGACAGAGATGAATATGGATTGGAATGGGAGCATGACACCCTTTGTTCCTCGAGCCGAGTCTTCCTTAAGCTTCCTCTACAACTACaactataactataactacACTCCATATCCACCACATCAAGacATGGAAGTGAGGCATCCAGGATGGACAGAGAGACATGGAAAACAGGAAACAAAGAAGCAGAGATTAAGGAAAGAGCAGATAGATTTACTGGAGAGGAGTTTCGAGAAGGAGAAAAAATTGGACGGAGAGAGGAAGATGAAGCTATCAATGGAGGTAGGGCTGCAACCTCGGCAGATAGCTGTTTGGTTCCAGAATAGGCGAGCAAGGTGGAAGGCTAAGCAGCTTGAGCACTTGTATGATGATCTTAAACACCAATTTGATGTCATGTATCAGGAAAAAAACAAGCTTCAGCAAgagGTTATGAAGTTGAAGGCTATGGTGAGAGAGCAGGCATCTGCAAAAGTGTAG 504 0.4246 MALKLRGKVKTEMNMDWNGSMTPFVPRAESSLSFLYNYNYNYNYTPYPPHQDMEVRHPGWTERHGKQETKKQRLRKEQIDLLERSFEKEKKLDGERKMKLSMEVGLQPRQIAVWFQNRRARWKAKQLEHLYDDLKHQFDVMYQEKNKLQQEVMKLKAMVREQASAKV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0995 167 Gene3D - 64 130 - -
Sto8g0995 167 SUPERFAMILY Homeodomain-like 46 127 IPR009057 -
Sto8g0995 167 Coils Coil 117 165 - -
Sto8g0995 167 CDD homeodomain 70 126 IPR001356 GO:0003677
Sto8g0995 167 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 15 163 IPR045224 GO:0003700
Sto8g0995 167 ProSiteProfiles 'Homeobox' domain profile. 65 125 IPR001356 GO:0003677
Sto8g0995 167 ProSitePatterns 'Homeobox' domain signature. 100 123 IPR017970 GO:0000981|GO:0006355
Sto8g0995 167 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 15 163 - -
Sto8g0995 167 Pfam Homeodomain 70 123 IPR001356 GO:0003677
Sto8g0995 167 Pfam Homeobox associated leucine zipper 125 159 IPR003106 GO:0006355|GO:0043565
Sto8g0995 167 SMART HOX_1 67 129 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0995 Sto-Chr8 6259948 6260636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0995 22 166 Homeobox Transcription Factor Family AT2G36610 41.954 5.98e-37 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sto8g0995 Homeodomain 1.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0995 - - gmx:100778007 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3130 13 35611225 35612503 Sto8g0995 8 6259948 6260636 CCT
Sto8g0995 8 6259948 6260636 Sto8g0995 8 6259948 6260636 ECH