Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0994 ATGGTGCTCAAGACGGAGCTTTGTCGATTCAGTGGAGCCAAGATATACCCTGGGAAAGGCATTAGATTTATTCGTTCTGATTCTCAGGTATTCTTGTTTGCCAACTCAAAGTGCAAAAGATATTTCCACAACCGTTTGAAGCCATCAAAGCTTACATGGACTGCCATGTATAGGAAGCAACACAAGAAGGATATTGCCCAAGAAGCTGTGAAGAAGAGGCGTCGCACTACCAAAAAGCCCTACTCTAGGTCCATTGTTGGTGCTACTTTGGAAGTTATTCAGAAGAAAAGAACTGAGAAGCCCGAGGTTCGAGATGCTGCAAGGGAAGCTGCTCTCCGTGAAATCAAGGAGAGGATCAAGAAAACAAAGGACGAGAAGAAGGCAAAGAAGGCAGAAGTTATGGCAAAGGCACAAAAAGCAGGAGGCAAAGGCAACATTCCCAAGGGTGCTGCACCCAAAGGCCCTAAAATTGGTGGTGGGGGAGGGAAGCGCTGA 495 0.4667 MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKAQKAGGKGNIPKGAAPKGPKIGGGGGKR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0994 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Sto8g0994 164 Coils Coil 112 136 - -
Sto8g0994 164 MobiDBLite consensus disorder prediction 120 164 - -
Sto8g0994 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Sto8g0994 164 MobiDBLite consensus disorder prediction 120 136 - -
Sto8g0994 164 Gene3D - 69 139 - -
Sto8g0994 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Sto8g0994 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Sto8g0994 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Sto8g0994 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 IPR000988 -
Sto8g0994 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 - -
Sto8g0994 164 SMART 4TRASH 8 46 IPR011017 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0994 Sto-Chr8 6254850 6256780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0994 1 157 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 86.624 1.47e-88 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0994 K02896 - rcu:8274878 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0994 8 6254850 6256780 Sto13g3131 13 35615164 35617335 CCT
Sto8g0994 8 6254850 6256780 Sto8g0994 8 6254850 6256780 ECH