Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0981 ATGTTGGTGCCTCCGTGGCTGGAGCCTCTGCTAAAGACATCGTTTTTCAACGTCTGCCGTTTTCACGGTGACGGCGCCAGGAGCGAGTGTAACATGTTCTGCCTCGACTGCAACCGCGACGCATTTTGCTTTTATTGCCGTTCCTCCAGACACAAGGACCATCAAGTCATTCAGATAAGGCGATCCTCGTATCACGATGTAGTGAGAGTGTCTGAGATTCAGAAGGTGTTGGATATAAGTGGGGTTCAGACATATGTGATAAACAGTGCGAGAGTTCTGTTCTTGAACGAGAGGCCTCAGCCAAAATCTGGAAAAGGAGTAGCTCACATTTGCGAGATTTGTGGAAGAAGCCTTTTGGACCCATTTCGGTTCTGTTCTTTGGGTTGTAAGCTTGTGGGAGTGAAGAGAAATGGGGACGCAAGCTTTGCTTTGGATGGAAACAACGAGGCATTAGCATTAGAAAGAAGGGATGGGATATCGAGGAGGTCAGTATCGTCCAgatcagaagaagaagaatcgcGTGAGGGCTCGCAACAAGACATGTATCCGGCCACGCCTCCTCCACCTGCTTCAActgcaagaagaagaaaaggcaTTCCTCACAGGGCTCCATTTGcctcttaa 624 0.4535 MLVPPWLEPLLKTSFFNVCRFHGDGARSECNMFCLDCNRDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGVKRNGDASFALDGNNEALALERRDGISRRSVSSRSEEEESREGSQQDMYPATPPPPASTARRRKGIPHRAPFAS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0981 207 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 206 - -
Sto8g0981 207 MobiDBLite consensus disorder prediction 158 207 - -
Sto8g0981 207 Pfam PLATZ transcription factor 60 131 IPR006734 -
Sto8g0981 207 MobiDBLite consensus disorder prediction 158 177 - -
Sto8g0981 207 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 206 - -
Sto8g0981 207 SUPERFAMILY B-box zinc-binding domain 16 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0981 Sto-Chr8 6172640 6173835 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Sto8g0981 PLATZ 9.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0981 - - gmx:100809455 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0981 8 6172640 6173835 Sto13g3153 13 35734332 35735474 CCT