Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0951 ATGTCGAAGAAAGCAGGAGCTGCTTTGCTTCAGAAGGATGCGCCTTGGAGAGTATCGTCGGAGAAACCCATACCCAAAATTCATCATTCTCCAATCCTTCGCGTTTCCCACACCCCTCACTCCGATTATGCCCTCTCCGTTATGAAGCACCCCAATCCTATTGGCAGTGGCTTGGCTGAAGAAGCCATAGTGGAAGCGGCGGGTCCTGACTGCATCGTTCCTGGCCAGATAACGCCCATCAAACTACTTGGCGTCAAGGTCTGGCCTATCAATGTAGATTTGAAGTTTATGGAACCAGTTGGACGTGAACTTAAGTTGCTTGGGAAGCAAAGCATGAAAGGAGAAAATTTGCGAAAAGGACCTTGGCTTCAAGAGGAAGATGATCAACTCACCACCTTTGTTACTTGTCTCGGCGAACGGAGGTGGGATTCGCTTGCCAAAGTTGCCGGCCTCAGGAGAAGTGGTAAAAGTTGCAGGTTGAGGTGGATGAACTATCTTCGTCCAAATCTGAAGCATGGCCCTTTCAGTGTTGAGGAAGAGCAACTCATCCTTCAGCTTCACCAACAATGGGGTAACAAGTGGTCAAAGATTGCACGAAGCCTACCAGGAAGAACAGACAATGAAGTGAAGAATTACTGGAGAACTCATTTAAGAAAGAAAGCAAAAGTTGAACAGCAGGAAGATGAGTTCCAATATAATAAACTCGACAGCACTGAAGAAGTTGTGTTGTGTGAAAAAAGCATGGACGAGGTATGCAAGGAAGTGAACCTAGAATGTGAAGAAAATGAGTGTGGGACTAATGATAATTCCATTCTTCCATTATCAGACTGGGAATTGGCATGTTCACCATATGAAATCCGAATATCAGATTGGATAGCAGAATTGCAAAGAGATCAGAGTGAAATAGAATATGAACAGGACAATCATAGCAGTGAGTCTAGTGTATCTTATTCTTATCCTACATGTTTCGGGAATGATTGTGATACATGGGATTATTCAGGCTCCCTCTGGGACATGAATTGA 1023 0.4448 MSKKAGAALLQKDAPWRVSSEKPIPKIHHSPILRVSHTPHSDYALSVMKHPNPIGSGLAEEAIVEAAGPDCIVPGQITPIKLLGVKVWPINVDLKFMEPVGRELKLLGKQSMKGENLRKGPWLQEEDDQLTTFVTCLGERRWDSLAKVAGLRRSGKSCRLRWMNYLRPNLKHGPFSVEEEQLILQLHQQWGNKWSKIARSLPGRTDNEVKNYWRTHLRKKAKVEQQEDEFQYNKLDSTEEVVLCEKSMDEVCKEVNLECEENECGTNDNSILPLSDWELACSPYEIRISDWIAELQRDQSEIEYEQDNHSSESSVSYSYPTCFGNDCDTWDYSGSLWDMN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0951 340 PANTHER MYB TRANSCRIPTION FACTOR 111 340 - -
Sto8g0951 340 CDD SANT 174 217 IPR001005 -
Sto8g0951 340 ProSiteProfiles Myb-like domain profile. 114 166 IPR001005 -
Sto8g0951 340 Gene3D - 173 242 - -
Sto8g0951 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 167 221 IPR017930 -
Sto8g0951 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 166 IPR017930 -
Sto8g0951 340 Pfam Myb-like DNA-binding domain 119 166 IPR001005 -
Sto8g0951 340 Pfam Myb-like DNA-binding domain 173 217 IPR001005 -
Sto8g0951 340 ProSiteProfiles Myb-like domain profile. 167 217 IPR001005 -
Sto8g0951 340 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 111 340 - -
Sto8g0951 340 CDD SANT 121 166 IPR001005 -
Sto8g0951 340 SUPERFAMILY Homeodomain-like 116 213 IPR009057 -
Sto8g0951 340 SMART sant 118 168 IPR001005 -
Sto8g0951 340 SMART sant 171 219 IPR001005 -
Sto8g0951 340 Gene3D - 110 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0951 Sto-Chr8 5994961 5999461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0951 115 222 MYB Transcription Factor Family AT5G59780 65.741 6.81e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto8g0951 Myb_DNA-binding 3.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0951 K09422 - gmx:100783472 294.278