LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto8g0947	ATGCCGATCCGAAACATCGCCGTCGGTAGACCCGAGGAGGCCACTCACCCTGACACCTTGAAGGCAGGGTTAGCCGAGTTCATTTCCACCCTCATCTTCGTCTTCGCCGGCTCAGGCTCCGGCATAGCCTTCAACAAACTCACCGACAACGGCGCCACCACTCCCGCCGGTCTTATCTCCGCCTCAATCGCCCACGCATTCGGACTTTTCGTCGCGGTCTCCGTTGGTGCTAACATCTCCGGTGGCCACGTCAACCCCGCTGTCACATTCGGCGCCTTCATCGCTCAGCTTCTTGGCTCCACCGTTGCCTGTTTGCTCCTCAGGTTCGTCACCGCAGAGCAGAGCGTACCTGCTTTTGGACTGTCTTCGGGAGTTGGAGTATGGAACGCGGTGGTGTTTGAGATCGTCATGACATTTGGATTGGTGTACACGGTGTACGCCACAGCCGTTGATCCCAAGAGGGGCAGTTTGGGAACTATTGCCCCCATCGCAATTGGTTTCATTGTTGGAGCCAACATTTTGGCGGGTGGTGCCTTCGACGGAGCATCCATGAACCCCGCTGTCTCTTTTGGGCCTGCTTTGGTCAGCTGGACCTGGGCCAACCACTGGATCTACTGGGTTGGCCCACTCATTGGTGGTGGCCTTGCTGGTGCCGTTTACGAGTTGTTCTTCATCTCCAACACCCATGAGCAACTCCCCACCACTGATTACTAG	714	0.57	MPIRNIAVGRPEEATHPDTLKAGLAEFISTLIFVFAGSGSGIAFNKLTDNGATTPAGLISASIAHAFGLFVAVSVGANISGGHVNPAVTFGAFIAQLLGSTVACLLLRFVTAEQSVPAFGLSSGVGVWNAVVFEIVMTFGLVYTVYATAVDPKRGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWTWANHWIYWVGPLIGGGLAGAVYELFFISNTHEQLPTTDY	237

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto8g0947	237	Gene3D	Glycerol uptake facilitator protein.	4	237	IPR023271	-
	Sto8g0947	237	PANTHER	AQUAPORIN-8	1	237	IPR034294	-
	Sto8g0947	237	Pfam	Major intrinsic protein	14	220	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Sto8g0947	237	CDD	MIP	21	223	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Sto8g0947	237	ProSitePatterns	MIP family signature.	83	91	IPR022357	-
	Sto8g0947	237	PRINTS	Major intrinsic protein family signature	21	40	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Sto8g0947	237	PRINTS	Major intrinsic protein family signature	65	89	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Sto8g0947	237	PRINTS	Major intrinsic protein family signature	133	151	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Sto8g0947	237	PRINTS	Major intrinsic protein family signature	166	188	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Sto8g0947	237	PRINTS	Major intrinsic protein family signature	203	223	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Sto8g0947	237	PANTHER	AQUAPORIN TIP1-1	1	237	-	-
	Sto8g0947	237	SUPERFAMILY	Aquaporin-like	12	233	IPR023271	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto8g0947	Sto-Chr8	5969582	5970433	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto8g0947	1	237	Major Intrinsic Protein MIP	AT2G36830	78.884	4.31e-141	393

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto8g0947	K09873		-	zju:107431962	416.387

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto8g0947	8	5969582	5970433	Sto8g0947	8	5969582	5970433	ECH