Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0938 ATGGCGGATCCATCCGACGATTCTCTCTACATTGTAAATGCACAACTAATTGATCTCGAAGGAGAGTACGGAGCCAGCGGAGAAGAGGAGGACGACGACGAAGTGTACATTCCACTCGCACACTCGCCTAGGGCATCGCGAGACGGTCCTTCTTCCTCTAATCAACCAGTTACTTTAATTCATGAGGAACCAGAGAATCGTGTTGAAGAAGAGGGAAACAAACGGCGGAAAACTGAAGGAAGGGAAGCGTGCTCGTCTTTGGGAATTGGGAGCGCCGAGAGTAATCAAGGGAATGAGTGGAATCGTTCTGAAATTGATGGCTTGTTTTGCCCCATTTGCATGGATGCTTGGACCGATAACGGCGAACATCATATCTGCTGTCTTCCTTGTGGACACATATATGGTATGTCCTGCATCAAAAAATGGCTTCAACAGCGAAAAAATTCCGGGAAGTGTCCTCAATGCAATAGGAAATCTGCATTAAGGGATGTGAGGAAACTCTTTGCTTCACGGGTACTTGCTGCTGATGAAGAGTCGCAAAAGAAAATTCGGTCCCTGGAGGCCAAATGTGCTCTTCTCGAAAGCATGACAAATGCCCATTTGGAGTGGCTGATGAGAAATAAGGAGAGGAGGCAAATTGGAGTCGTGAATACCAATGATAACTGCCAATGGAGATCTGAATCCAAACATGGCTTTGGCTCAAAGATATATGGGAAAGGACCTTATTGCAATTTTGAATTGCAGAAAGTGTTTCAGCTGAACGGTGCACAGGTATTTGATCTAGATGCTTCtaatcaaattttattaattgcaCAAAGGTCAAAAGAGATAGGTGGAACACACCTACTTACTAAAATGAGCTTGTTACCTCCATATGAGATGGAAGATATCTTACTGCCTTCTACTTCAAGTGCTATTAAAGATCTACATATTTCCCCATTTAATGGTGACCTGGCCCTTTATGCTTCATTAGGGAGGAAATTATCAGTACTCAGCATGGAGAGCAACAATCTGGTTGTCAATTATGATCTACAGGTTCCAGCTTGGTCATGCTCATGGGATCTCAATAGCTCTCATTACGTATACGCAGGACTGCAGAATGGTTCTGTCTTGGTATTTGATATGCGTCATACTGCAGGGCCCATTAAGTCTCTAAATGGGTTAACTAGAAACCCAGTTCATACTGTACAGTCTCTTGTACAAGATTCCAGTATTCCTTCTGGTGTTGGATCCATTCTATCTGCTTCGGCCATTGGCCTATGTCAGTGGAATATAGGTGCTGAAGAAGGGCCATGTATGATTCCTGAAACTAGTAATCAAGGGGTTTGTATATCTCTTGCCAATCGCCCACGTATTGATGAAATTGTTGTTTCATACCGTCCCAAAGTTGACATGTCCATTGATGTGCCTCTTTCTCAATCGGCATTTGCTCCTTCCCAAGTTAATGGGCAAGGAGTACAGGGCTCTCATGTCCTCCTCAAGAGAGTTGGCAGAAATCATTTTCAAAAGATGGGCTCCTCATGTGTCAATGTAAGTAACATTCGACTTCCAAAATGTGTAATTATAGATGTAGAGAGTGAAAGCAGATTGTTAGCTTCTGGAGATGAAGTTTCATGTGAATTGGTCTTGCAAGAATTGCCATCTTTTAGAGTCCTGCAGCGTTTCACATGCCGGGATCATGTGCGTGATCTAAAATACTCACCTACTCTGAACCATGGGTTACTGGGTTGTTTAACTGAGAAGTCATTGCAGCTTTTCTGTGCCAAACTCTCATGA 1776 0.4313 MADPSDDSLYIVNAQLIDLEGEYGASGEEEDDDEVYIPLAHSPRASRDGPSSSNQPVTLIHEEPENRVEEEGNKRRKTEGREACSSLGIGSAESNQGNEWNRSEIDGLFCPICMDAWTDNGEHHICCLPCGHIYGMSCIKKWLQQRKNSGKCPQCNRKSALRDVRKLFASRVLAADEESQKKIRSLEAKCALLESMTNAHLEWLMRNKERRQIGVVNTNDNCQWRSESKHGFGSKIYGKGPYCNFELQKVFQLNGAQVFDLDASNQILLIAQRSKEIGGTHLLTKMSLLPPYEMEDILLPSTSSAIKDLHISPFNGDLALYASLGRKLSVLSMESNNLVVNYDLQVPAWSCSWDLNSSHYVYAGLQNGSVLVFDMRHTAGPIKSLNGLTRNPVHTVQSLVQDSSIPSGVGSILSASAIGLCQWNIGAEEGPCMIPETSNQGVCISLANRPRIDEIVVSYRPKVDMSIDVPLSQSAFAPSQVNGQGVQGSHVLLKRVGRNHFQKMGSSCVNVSNIRLPKCVIIDVESESRLLASGDEVSCELVLQELPSFRVLQRFTCRDHVRDLKYSPTLNHGLLGCLTEKSLQLFCAKLS 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0938 591 SMART ring_2 110 155 IPR001841 -
Sto8g0938 591 Pfam Ring finger domain 110 156 IPR001841 -
Sto8g0938 591 MobiDBLite consensus disorder prediction 62 82 - -
Sto8g0938 591 Gene3D - 178 462 IPR015943 GO:0005515
Sto8g0938 591 PANTHER RFWD3 PROTEIN 26 586 IPR037381 GO:0004842|GO:0005634|GO:0016567|GO:0036297
Sto8g0938 591 SUPERFAMILY RING/U-box 100 159 - -
Sto8g0938 591 ProSiteProfiles Zinc finger RING-type profile. 110 156 IPR001841 -
Sto8g0938 591 MobiDBLite consensus disorder prediction 22 88 - -
Sto8g0938 591 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 26 586 - -
Sto8g0938 591 SUPERFAMILY WD40 repeat-like 242 571 IPR036322 GO:0005515
Sto8g0938 591 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 177 IPR013083 -
Sto8g0938 591 CDD mRING-C3HGC3_RFWD3 106 156 - -
Sto8g0938 591 MobiDBLite consensus disorder prediction 46 60 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0938 109 161 C3H Transcription Factor Family AT1G51930 42.593 3.40e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0938 K15691 - jre:109007435 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0938 8 5909479 5913955 Sto8g0938 8 5909479 5913955 ECH