Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0933 ATGTCACAAGATTCTTCTGAGGAGATAAAGACGATTGAGCAGTGGAAATGGTCCGAAATGCAAGGCCTTGAGCTCCTCCCTCCTTCTCCTATTCCACACCAAACAGAGCAAAACAGAGACGCCAAAACAGAGGAACCCACCAAATCAGATATGGAAAGCTCTGAGCCCAAGAAAAAAGATGGCGGAGACAAGCCTGAGAGTGTTCCCGCTGCTGGGTTCGGCGAACTTTTCCGATTCGCCGATGGGTTGGATTATATTCTAATGGCCATCGGAACGGTGGGAGCAATCGTACATGGTTGTTCTTTGCCTCTGTTTCTCCGCTTCTTCGCCGATCTTGTAAATTCTTTTGGGTCCAATGCCAATGATGTGGAGAAGATGACACAGGAAGTCGTCAAGTACGCATTTTACTTCTTGGTGGTGGGTGCTGCTATATGGGCATCCTCATGGGCAGaGATATCGTGCTGGATGTGGAGTGGAGAACGCCAATCGACCAAAATGAGGATCAAGTATCTAGAAGCAGCCTTGAACCAGGACATTCAGTATTTCGACACCGAGGTTCGAACATCCGACGTTGTCTTTGCCATCAACACTGATGCCGTGATGGTTCAAGACGCCATTAGCGAGAAGCTTGGGAATTTCATTCACTACATGGCTACATTCGTTTCTGGATTCGTGGTAGGTTTCACGGCTGTTTGGCAATTAGCTCTCGTCACTCTCGCCGTGGTTCCGATGATAGCTGTAATCGGAGGCATTCACACCACCACGTTAGCCAAGCTCTCCGGCAAGAGCCAGGAAGCTCTCTCTCAAGCTGGCAACACTGTGGAACAGACGGTGGCGCAAATTCGAGTGGTGTTGGCATTCGTTGGGGAGAACAGGGCATTACAAGCCTACTCGTCGGCGTTGAAAGTAGCCCAGAAGATTGGGTACAAAACTGGGCTTGCAAAGGGAATGGGATTGGGTGCGACGTACTTTGTCGTCTTCTGCTGTTATGCTCTTTTGTTATGGTACGGAGGGTACCTCGTAAGGCACCACTACACCAACGGAGGACTCGCCATTGCCACCATGTTTGCTGTTATGATAGGTGGATTggctttagggCAATCTGCGCCTAGCATGGCAGCATTTACAAAAGCCAGAGTTGCTGCTGGAAGAATCTTGCGAATCATCGATCACAAGCCAGGAATAGACAGAAATAGTGATTCGGGGTTGGAATTAGAGTCAGTCACAGGACATGTGGAACTGAAAAATGTAGACTTTTCATACCCATCAAGGCCGGATGTTAGAATCCTCAATGATTTCTCACTAGTAGTGCCTGCCGGAAAGACCATAGCTTTGGTCGGGAGTAGTGGCTCCGGCAAGAGCACCGTCGTCTCTCTTATTGAAAGATTCTATGACCCAACTTCTGGACACGTTGTGCTTGATGGGCATGACATTAAAACGTTGAAGCTTAGATGGCTAAGGCAGCAAATAGGACTAGTAAGCCAAGAGCCTGCGTTATTTGCTACCACAATTAGAGATAATATACTTTTGGGTAGGCCAGATGCAGATCAGGTTGAGATTGAAGAAGCTGCAAGAGTAGCTAATGCTCATTCTTTCATTATTAAGCTTCCTGAAGGCTATGATACCCAGGTAGGAGAGAGAGGGCTGCAGCTTTCAGGAGGCCAAAAACAGAGGATAGCAATAGCGAGAGCAATGCTAAAAAATCCGGCAATTCTTCTGCTGGATGAAGCAACAAGTGCATTAGACTCGGAGTCAGAAAAGCTGGTTCAAGAAGCCCTTGATCGGTTCATGATTGGTAGAACAACTCTTGTAATAGCCCATCGCCTCTCTACTATTCGCAAAGCTGACCTTGTAGCTGTACTTCAGCAAGGAAGTGTTTCTGAAATTGGAACACATGATGAGCTCTTTGCTAAAGGTGAAAATGGAGTCTATGCCAAGCTTATCCGGATGCAGGAGGCAGCACATGAAACTGCTCTCAGTAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCTAGAAACTCTGTAAGCTCACCGATAATTGCTCGAAATTCTTCTTATGGCCGGTCACCATACTCTCGCAGGCTATCTGACTTCTCTACTTCTGACTTCAGTCTGTCCATTGATGCACCACATCCAAATTACAGGCTTGAAAAGCTTGCCTTCAAAGACCAAGCTAGTTCCTTCTGGCGTCTTGCCAAAATGAACTCTCCCGAGTGGTTATATGCTTTAATTGGTTCCATAGGCTCTGTTGTTTGTGGCTCTCTTAGTGCATTCTTTGCTTATGTCCTCAGTGCAGTCCTTAGTGTCTATTACAATCCCAACCACAAATTTATGATCCGCGAAATAGAGAAGTACTGCTACTTGTTGATTGGCCTTTCATCAGCTGCACTTCTCTTCAATACACTGCAGCATTTTTTCTGGGATATCGTGGGAGAAAATCTTACAAAGCGAGTAAGGGAGAAAATGCTGACTGCAGTGCTCAAGAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCTAGGATTGCAGCAAGGCTTGCTCTTGATGCTAACAACGTCAGATCAGCCATTGGAGATCGGATTTCAGTAATTGTCCAGAATACCGCACTTATGCTAGTTGCATGTACTGCTGGGTTTGTTTTGCAGTGGCGCCTTGCCCTTGTCCTCGTAGCCGTCTTCCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCGGGAGATCTAGAAGCTGCTCATGCCAAGGCCACACAACTAGCAGGAGAGGCTATTGCAAATGTCAGAACTGTTGCTGCCTTCAACTCAGAAACAAAAATTGTTGGTCTTTTCACTTCCAATCTTGAAACTCCACTACGACGATGTTTTTGGAAAGGACAGATTTCTGGAAGTGGATTTGGGGTAGCTCAGTTTGCACTTTATGCTTCCTATGCACTTGGTCTGTGGTATGCTTCCTGGCTTGTGAAGCACGGAATCTCCGATTTCTCTAAAACAATTAGAGTTTTCATGGTCCTCATGGTCTCTGCCAATGGTGCTGCTGAAACTCTAACTCTAGCTCCAGATTTCATCAAGGGTGGTCGAGCCATGAAGTCAGTATTTGACCTCCTTGATCGAAGAACTGAAATTGATCCAGATGATCCAGATGCTACTCCTGCGCCTGATCGTCTTCGTGGAGAAGTTGAACTTAAGCATGTTGACTTCTCATATCCCACTCGCCCAGACATGCCTGTATTTCGTGACCTGAGTCTTCGTGCCAGAGCAGGTAAAACCCTTGCCCTTGTTGGACCTAGTGGCTGTGGTAAGAGCTCGGTCATCGCACTTGTACAGCGTTTCTATGATCCGACCTCTGGCCGGGTTATGTTTGATGGAAAAGACATAAGAAAGTACAATCTCAAGTCCCTCCGGAGGCACATTGCTGTGGTACCTCAAGAACCCTGCCTGTTTGCCACTACTATATACGAAAACATTGCTTATGGGCACGACTCGGCAACAGAAGCCGAGATAATAGAAGCAGCAACTCTTGCCAACGCCCACAAGTTCATATCAGCACTGCCGGATGGATACAAGACATTTGTAGGGGAAAGAGGAGTTCAATTATCTGGAGGGCAAAAGCAGAGAATAGCGATTGCTCGAGCTTTTTTGAGGAAAGCAGAGCTTATGCTTCTTGATGAAGCAACAAGTGCACTTGATGCTGAGTCTGAGAGGTGTGTTCAGGAGGCTTTGGACCGAGCATGCTCTGGGAAAACAACCATCATTGTTGCACACAGGCTTTCAACTATTAGGAATGCGAATCTCATTGCCGTGATTGATGATGGGAAAGTTGCAGAGCAAGGATCACACTCacaattattgaaaaattaccCAGATGGGATCTATGCACGCATGATTCAGTTACAAAGGTTTACACACAACCAAGTGGTTGGAATGACCTCGGGTTCAAGTTCTTCTACAAGACCAAGGGATGATGAAAGAGAAAACTAG 4002 0.462 MSQDSSEEIKTIEQWKWSEMQGLELLPPSPIPHQTEQNRDAKTEEPTKSDMESSEPKKKDGGDKPESVPAAGFGELFRFADGLDYILMAIGTVGAIVHGCSLPLFLRFFADLVNSFGSNANDVEKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWSGERQSTKMRIKYLEAALNQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTTTLAKLSGKSQEALSQAGNTVEQTVAQIRVVLAFVGENRALQAYSSALKVAQKIGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLALGQSAPSMAAFTKARVAAGRILRIIDHKPGIDRNSDSGLELESVTGHVELKNVDFSYPSRPDVRILNDFSLVVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGHVVLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRDNILLGRPDADQVEIEEAARVANAHSFIIKLPEGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFAKGENGVYAKLIRMQEAAHETALSNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSIDAPHPNYRLEKLAFKDQASSFWRLAKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPNHKFMIREIEKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSETKIVGLFTSNLETPLRRCFWKGQISGSGFGVAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMKSVFDLLDRRTEIDPDDPDATPAPDRLRGEVELKHVDFSYPTRPDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYDPTSGRVMFDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISALPDGYKTFVGERGVQLSGGQKQRIAIARAFLRKAELMLLDEATSALDAESERCVQEALDRACSGKTTIIVAHRLSTIRNANLIAVIDDGKVAEQGSHSQLLKNYPDGIYARMIQLQRFTHNQVVGMTSGSSSSTRPRDDEREN 1333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0933 1333 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 88 1310 - -
Sto8g0933 1333 MobiDBLite consensus disorder prediction 1314 1333 - -
Sto8g0933 1333 CDD ABC_6TM_Pgp_ABCB1_D1_like 88 385 - -
Sto8g0933 1333 Pfam ABC transporter 430 579 IPR003439 GO:0005524
Sto8g0933 1333 Pfam ABC transporter 1086 1234 IPR003439 GO:0005524
Sto8g0933 1333 ProSitePatterns ABC transporters family signature. 1206 1220 IPR017871 GO:0005524
Sto8g0933 1333 SMART AAA_5 1094 1286 IPR003593 -
Sto8g0933 1333 SMART AAA_5 439 625 IPR003593 -
Sto8g0933 1333 Gene3D - 1058 1314 IPR027417 -
Sto8g0933 1333 MobiDBLite consensus disorder prediction 37 65 - -
Sto8g0933 1333 Gene3D ABC transporter type 1, transmembrane domain 135 1040 IPR036640 GO:0005524|GO:0016021
Sto8g0933 1333 Pfam ABC transporter transmembrane region 745 1014 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g0933 1333 Pfam ABC transporter transmembrane region 88 361 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g0933 1333 CDD ABC_MTABC3_MDL1_MDL2 1067 1306 - -
Sto8g0933 1333 ProSitePatterns ABC transporters family signature. 551 565 IPR017871 GO:0005524
Sto8g0933 1333 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 744 1031 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto8g0933 1333 CDD ABC_MTABC3_MDL1_MDL2 412 651 - -
Sto8g0933 1333 MobiDBLite consensus disorder prediction 23 66 - -
Sto8g0933 1333 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 412 648 IPR003439 GO:0005524
Sto8g0933 1333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 403 651 IPR027417 -
Sto8g0933 1333 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1067 1303 IPR003439 GO:0005524
Sto8g0933 1333 SUPERFAMILY ABC transporter transmembrane region 731 1053 IPR036640 GO:0005524|GO:0016021
Sto8g0933 1333 Gene3D - 410 675 IPR027417 -
Sto8g0933 1333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1059 1306 IPR027417 -
Sto8g0933 1333 CDD ABC_6TM_Pgp_ABCB1_D2_like 733 1049 - -
Sto8g0933 1333 SUPERFAMILY ABC transporter transmembrane region 76 396 IPR036640 GO:0005524|GO:0016021
Sto8g0933 1333 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 88 1310 IPR039421 -
Sto8g0933 1333 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 89 377 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0933 Sto-Chr8 5856274 5863643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0933 46 1328 Calmodulin-binding Proteins AT2G36910 88.006 0.0 2313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0933 K05658 - gmx:100814667 2326.21