Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0917 ATGAGGGTTGGGGCACCCTTGTTGAATCATTTGCATCACCACAAAGGAGTCAGTTTCAATGATCACTTTGGGCCAGTTCCTATCCTTGGCAATTCGGAGGGCCGACCAAACCGCCCACGCTTCAGCTTGAAAGCTGTTGCTTCTACCAATTCGGTGAGCAAAGTCAAGAATCCAAGTGCCATTATTGTCTCTAGCAATCCCCCCACAAGAGCTGCTATCAGTATGAGGACAGTGGGAACCATCAATATTGAACTTGATCCACCCTTCATTGGGAGCCTTCCATTTAGGGGGCCATCCCCCACCGCTGACTCCAACTCCAATGTGCAACTCGCCCTCCCTCGGAAATCCACCGCATTATCTTCTTCTCGCTCCACCAAAGACCGCCACACTAAGGTCAACGGCCGTGGCCGCCGTGTCCGCATGCCGCCACTCTGCGCCGCTCGAATTTTCCAACTGACACGAGAACTCGGCCACCGCTCCGACGGTGAGACCATCGAGTGGCTGCTACGCCAGGCCGAGCCATCCATCATCGCCGCCACCGGAACCGGAACAGTCCCCGCTGCACCAGTATCCACCAGCAACGCCACGATCGTCTCCTCAGCGCCCTCTGTTCCTTGCCGGGTCCACCCCGTTTCATCTGCCAGCAGTGGACAGGGGATGTTCACAATGGCTTTGCAACAGGCGCAGCCGAGTTGTCGATTAGACTTGTGTCAGCCAATGGCAATGGAGTACGCCGCGGCCGCGGCGGCTAATGGGTACAGGAATATGCCGTTCACTGCCTTGTTATTGCAGCCATCGACTGAGGAGGCGGAGGAAACCCAGCAAGATGAGACTCTCAGAGAACAATAG 849 0.5607 MRVGAPLLNHLHHHKGVSFNDHFGPVPILGNSEGRPNRPRFSLKAVASTNSVSKVKNPSAIIVSSNPPTRAAISMRTVGTINIELDPPFIGSLPFRGPSPTADSNSNVQLALPRKSTALSSSRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPVSTSNATIVSSAPSVPCRVHPVSSASSGQGMFTMALQQAQPSCRLDLCQPMAMEYAAAAAANGYRNMPFTALLLQPSTEEAEETQQDETLREQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0917 282 ProSiteProfiles TCP domain profile. 125 179 IPR017887 -
Sto8g0917 282 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 106 240 IPR005333 GO:0003700
Sto8g0917 282 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 106 240 - -
Sto8g0917 282 Pfam TCP family transcription factor 124 201 IPR017887 -
Sto8g0917 282 MobiDBLite consensus disorder prediction 114 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0917 Sto-Chr8 5775154 5777514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0917 125 270 TCP Transcription Factor Family AT2G37000 54.110 3.12e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto8g0917 TCP 3.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0917 - - cam:101510590 238.81