Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0915 ATGAAGTGTTTTCCGTTTTACCATggagaaaagaaggaagaaccGAAGAGCATCAAGTTAGCTTCAGGTCTTTCTAATAGTTCCTTTAATGCTGAGGATGATGTAAGAAGATCTGGTTCTGAATTTAATTCTAAGGTTGCCTCAGAAAATAGCACAGACTCCCAAAGGAGGACTGCATTACCCAGTTTGTCTCAAAAACCCAGCAACCTGAAAGTATTTACTGTTTCTGAACTGAAATCAGCCACAAAAAATTTCAGTCGCTCTGTCATGCTTGGAGAGGGAGGGTTTGGGTGTGTATACAAGGGATTGATCAAGAGTGTTGAGGATCCATCCAGAAAAATTGAAGTTGCAGTTAAGCAACTTGGTAAAAGAGGAATGCAGGGGCATAAGGAATGGGTGACAGAAGTTAATGTTTTGGGCATTGTTGAGCATCCCAATCTTGTAAAACTAGTGGGTTACTGTGcagatgatgatgaaagagGAATCCAACGGCTTCTTATTTATGAATATATGCCCAACAGAAGTGTGGAACACCATTTATCACCCCGGTCAGAGACTCCTCTCCCGTGGGGTAGGAGATTGAAAATTGCAGAAGATGCAGCTCGTGGCTTAACATACCTGCATGAGGAAATGGATTTTCAGATTATCTTTAGAGATTTCAAATCTTCTAATATCCTTCTGGATGAGCATTGGAACGCAAAGCTATCAGACTTTGGATTAGCAAGATTGGGCCCATCTGAAGGATTAACTCATGTCTCAACAGCGGTTGTAGGAACAATGGGATATGCAGCTCCGGAATATGTTCAAACTGGACGTCTCACATCAAAGAGTGATGTATGGAGCTACGGTGTCTTCCTTTACGAACTAATCACTGGCAGGCGCCCTTTCGATCGAAATCGCCCTAAGGGTGAGCAGAAGCTCTTGGAATGGGTGAGACCATACTTAGCAGATGGCaagaaatttcaattaatattgGATCCAAGGCTTGATAAGAAACACCTCTTCAAATCAGCTCAAAGACTTGCTATAATAGCTAACCGGTGCTTGGTCAAAAACCCAAAGAATCGCCCTAAGATGAGTGAGGTATTGGATATGGTGAATCAGATTGTAGAATCTTCCTTAAGTGCAAGTCCACAGCTACCCCTGAAGAATTTGGCATCAGGTGAAGCATCACAGGACACTGAATCAAATAAcaagagaaggataatggatCTGAAAAGTGGAGATAGTAATTGGCTTTCTAAGATATGGAAACCTAAGCTTGTAAGAGCAAGTTGA 1278 0.3975 MKCFPFYHGEKKEEPKSIKLASGLSNSSFNAEDDVRRSGSEFNSKVASENSTDSQRRTALPSLSQKPSNLKVFTVSELKSATKNFSRSVMLGEGGFGCVYKGLIKSVEDPSRKIEVAVKQLGKRGMQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPRSETPLPWGRRLKIAEDAARGLTYLHEEMDFQIIFRDFKSSNILLDEHWNAKLSDFGLARLGPSEGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPFDRNRPKGEQKLLEWVRPYLADGKKFQLILDPRLDKKHLFKSAQRLAIIANRCLVKNPKNRPKMSEVLDMVNQIVESSLSASPQLPLKNLASGEASQDTESNNKRRIMDLKSGDSNWLSKIWKPKLVRAS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0915 425 PANTHER OS01G0588500 PROTEIN-RELATED 14 419 - -
Sto8g0915 425 MobiDBLite consensus disorder prediction 41 61 - -
Sto8g0915 425 MobiDBLite consensus disorder prediction 28 61 - -
Sto8g0915 425 Pfam Protein kinase domain 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0915 425 SUPERFAMILY Protein kinase-like (PK-like) 60 366 IPR011009 -
Sto8g0915 425 CDD STKc_IRAK 91 369 - -
Sto8g0915 425 PANTHER KINASE 1B 14 419 - -
Sto8g0915 425 Gene3D Transferase(Phosphotransferase) domain 1 171 380 - -
Sto8g0915 425 Gene3D Phosphorylase Kinase; domain 1 56 170 - -
Sto8g0915 425 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
Sto8g0915 425 ProSiteProfiles Protein kinase domain profile. 85 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0915 Sto-Chr8 5765148 5767411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0915 1 363 Glycoside Hydrolase AT3G07070 43.514 4.68e-92 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto8g0915 Pkinase 6.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0915 - - gmx:100790026 711.064