Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0914 ATGAAAGGGGGAAAGCACCAACTCCACCCACCCCTCACCCCCGTTACGCTTGATCTTCATTCTCTGATGAACAATCTTTCACCATCTGCAGTTTTCACGTCAATTTATCACAGTATTGTGGCATGCTCTAGAGAGGGTACAGGACTTGTTTCTTTAAACCTTCCAACACGCGTTCAATGTGAGGACGATGATGATTATGATTCCGGTAACACTGCCGCGCTACCCATTGTGACGGACTACGTCTATTCCCGCCTTACCAATATGACCACCGCCATCACCACTGACATCGAGGCAAAATTGGGGTTCTGCATTAAGGATGTGGATAAAGATTGGAATGAAGCATTTAATTTTACGGGAAAACTGGACTTCTTGACTGCTTGTATTAAGCAGGGAAAAGATGTCACACGTCGATTGTGTACCAGAGCTGAAATAAGATTATACTTCGGAGGTATCCTTAACCCGCTGTCTTCCAGTTACGTAAGACCTAACAGGAACTGCAATTTGACCTCATGGGTTTCTGGTTGTGAACCTGGTTGGGGTTGTCTTGCGGACAAGAATGTTGATCTGTCTTCTTCAAAGGATATTCCTGCTAGAATAGAGGAATGTTCACCTTGTTGTGAAGGGTTTTTCTGTCCTCAAGGATTGACTTGCATGATACCTTGCCCACTTGGTTCTTACTGTCCGCTTGCAAAACTGAACACTAATACTGGAATTTGTGATCCATATCGTTACCAGTTACCTGCGGGAGAGGCAAATCACACTTGTGGTAGCGCTCATGTTTGGACTGGTGTTTCCAACAGCAGTGACATCTTCTGTTCTGCAGGATCATACTGTCCAACAGCAACACAAAAAATTCCGTGCAGTAGTGGACATTACTGCAGGATGGGTTCCACTGTGGAAATGAGGTGCTCCCATTTCAGTACCTGTAAGGAAAACacagaaaatcaaaatatgcGTGCTTATGCGGCTTTGCTTATTGTTGCATTAAGTACTCTCCTGATCTTCATCTATAACTTTTATGATCAAGTTCTCTCTACTCGAGAAAGAAGATTGGCTAAATCCAGGGAAGCTGCGGCAAAGCATGCAAGAGAAACTGCACAAGCTCGTGAAAGGTGGAAATTAGCAAAAGATGTCGCTAAGAAGGGTGCAACGGGATTGCAAAAGCAGTTGTCCCGCACATTTTCTCGCAAGAAATCTGGAAAGGGAGAGCAGTTGAAGACAGTTAGTCTAGCCAAAGTTGGTACAGATATTACATCTGCAGATTCTTCAAGCACATCCGAGCAATCAATTTCAGCTTCAAAAGCAGAGGAACCTAGCAACcttattaaaatgttaaattcCATTGAGGATGACCCAAATAGCCAAGAAGGATTTAATCTGCAGATTGGagataaaaatagtaaaaagaatGCGCCAAAGGGCAAACACTTACACACGAAGAGCAAAATCTACAAGTATGCCTATGGTCAGCTGGAGAAGGAGAAAGCTATGCAAGAGGCAAACAAGAACTTGACTTTCTCAGGAGTGCTATCAATGGCAACTAGTGGAAGTGAGATTAGGAGAAGGCCTCCGATTGAGGTAGCTTTCAAAGATGTAACTCTCACtttgaaaggaaaaaacaaaCAAGTACTGAAGTGTGTGACTGGAAAAATCATGCCTGGGCGAGTTTCAGCTGTCATGGGTCCCTCAGGAGCTGGTAAAACGACATTTCTTTCTGCTTTGGGAGGAAAAGTAAGAGGATGTTCTATGACAGGCTCAATTCTAATCAACGGAAAACCTGAATCCATACATTggtataagaaaattattgggTATGTGCCACAAGATGATATTGTGCATGGGAATTTGACGGTGGAGGAAAATCTTCGTTTCAGTGCAGGATGCAGACTGCCCGCGGACATGGCAAAACCAGATAAGGTTCTGATTGTTGAAAGAGTAATTGAGTCCCTCGGACTCCATGCGGTGAGGGATTCCCTGGTTGGGACTGTAGAGCAGCGAGGTATCTCTGGAGGGCAAAAAAAACGTGTAAATGTAGGGCTAGAGATGGTAATGGAACCTTCTTTGTTGATCTTGGATGAGCCTACGACTGGTCTGGACAGTGCATCTTCTAGTCAACTCCTGAAAGCACTTCGACGTGAAGCTCTTGAAGGGGTAAATATCTGCATGGTACTTCACCAACCAAGCTATACTTTGTTCAGAATGTTCgatgatataatatttttagcTAAAGGTGGCCTAATTGCATATCTTGGCTCTGTTAAAAAAGTAGAAGAGTACTTTGCTTCCATTGGAATCCCTGTGCCGGATCGTGTGAATCCTCCAGACCATTTTATTGACATATTAGAGGGTTTAGAGAAACCAGCGGGAGGTGTGACTCACGAACAACTTCCTGTCAGATGGATGCTTCATAATGGTTACCCAGTACCACCGGATATGCTTCATTATGCTGATGAAATTGCTGCATCTTCTTCATCTGCCTCAACTTCAACTTCAACTTCAAGTGATGCAAAGAACATTACAGAAGAACCTATTCAACAATCCTTCTTTGCAGAGTTGTGGGGGACTATGAAGAATAATTTCGAGGTCCAACGAGATAATTTAGAGGCGAAATTCCTGATTATTAAGGACCTATCTAACCGAACAACTCCTGGAATAGGCCAGCAGTATAAATACTTTGTTGGGCGGATCAGTAAGCAGCGTCTGCGAGAAGCTAAAGCACAAGTAGTTGACtatatgattttattagttGCTGGTGCCATCTTAGGAATTCTTGCTAAAGTGAATGACTACACGTTTGGTGCCCTTGGCTACACTTATACTGTCATTGCAGTCTCTTTACTGTGTAAGATTGCTGCTCTTAGAACTTTTTCTCTGGATAAATTACAGTACGCGAGGGAGACAGCTGCTGGGATCAGCAGTCTAGCTCATTTTTTAGCCAAAGATACTGTTGATATCTTCAATGTAATCATCAAACCTGTAGTTTATCTGTCCATGTTCTATTTTTTTAGCAATCCAAGGTCGAGCTTTGCAAGCAATTACGTGGTTTTGCTTTGCCTTGTATACTGTGTGTCTGGGATGGCTTATGCATTTGCCATTCACTTCCAACCTGCCCCTGCTCAGCTGTGGTCAGTGCTTGTTCCTGTGGTTATGACTCTCATTGCAAACCAGCCTAAAGATACCGCATTTATGAGGAACCTAGTAAAATTGTGCTACCCAAATTGGGCTTTAGAGGCCTTTATCATTGCAAATTCTGAAAGGTACTCTGGGGTGTGGCTGATAAGTCGTTGTCGTTCACTGATGAACAATGGCTATGACCTCCACGATTGGTCTCTTTGTCTTATCGTACTCGTTTTGTATGGTGTAGTTTTCCGTATTGTGGCCTTCATTTGTCTATTGCTCTCACAGAGTAAGTGA 3414 0.4215 MKGGKHQLHPPLTPVTLDLHSLMNNLSPSAVFTSIYHSIVACSREGTGLVSLNLPTRVQCEDDDDYDSGNTAALPIVTDYVYSRLTNMTTAITTDIEAKLGFCIKDVDKDWNEAFNFTGKLDFLTACIKQGKDVTRRLCTRAEIRLYFGGILNPLSSSYVRPNRNCNLTSWVSGCEPGWGCLADKNVDLSSSKDIPARIEECSPCCEGFFCPQGLTCMIPCPLGSYCPLAKLNTNTGICDPYRYQLPAGEANHTCGSAHVWTGVSNSSDIFCSAGSYCPTATQKIPCSSGHYCRMGSTVEMRCSHFSTCKENTENQNMRAYAALLIVALSTLLIFIYNFYDQVLSTRERRLAKSREAAAKHARETAQARERWKLAKDVAKKGATGLQKQLSRTFSRKKSGKGEQLKTVSLAKVGTDITSADSSSTSEQSISASKAEEPSNLIKMLNSIEDDPNSQEGFNLQIGDKNSKKNAPKGKHLHTKSKIYKYAYGQLEKEKAMQEANKNLTFSGVLSMATSGSEIRRRPPIEVAFKDVTLTLKGKNKQVLKCVTGKIMPGRVSAVMGPSGAGKTTFLSALGGKVRGCSMTGSILINGKPESIHWYKKIIGYVPQDDIVHGNLTVEENLRFSAGCRLPADMAKPDKVLIVERVIESLGLHAVRDSLVGTVEQRGISGGQKKRVNVGLEMVMEPSLLILDEPTTGLDSASSSQLLKALRREALEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLIAYLGSVKKVEEYFASIGIPVPDRVNPPDHFIDILEGLEKPAGGVTHEQLPVRWMLHNGYPVPPDMLHYADEIAASSSSASTSTSTSSDAKNITEEPIQQSFFAELWGTMKNNFEVQRDNLEAKFLIIKDLSNRTTPGIGQQYKYFVGRISKQRLREAKAQVVDYMILLVAGAILGILAKVNDYTFGALGYTYTVIAVSLLCKIAALRTFSLDKLQYARETAAGISSLAHFLAKDTVDIFNVIIKPVVYLSMFYFFSNPRSSFASNYVVLLCLVYCVSGMAYAFAIHFQPAPAQLWSVLVPVVMTLIANQPKDTAFMRNLVKLCYPNWALEAFIIANSERYSGVWLISRCRSLMNNGYDLHDWSLCLIVLVLYGVVFRIVAFICLLLSQSK 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0914 1137 CDD ABCG_EPDR 524 751 - -
Sto8g0914 1137 Pfam ABC-2 type transporter 725 1135 IPR043926 GO:0140359
Sto8g0914 1137 Gene3D - 519 763 IPR027417 -
Sto8g0914 1137 MobiDBLite consensus disorder prediction 417 437 - -
Sto8g0914 1137 MobiDBLite consensus disorder prediction 417 436 - -
Sto8g0914 1137 ProSitePatterns ABC transporters family signature. 668 682 IPR017871 GO:0005524
Sto8g0914 1137 Pfam ABC transporter 544 695 IPR003439 GO:0005524
Sto8g0914 1137 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 527 769 IPR003439 GO:0005524
Sto8g0914 1137 SMART AAA_5 553 745 IPR003593 -
Sto8g0914 1137 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 70 1133 - -
Sto8g0914 1137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 524 749 IPR027417 -
Sto8g0914 1137 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 70 1133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0914 Sto-Chr8 5756268 5761981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0914 554 746 Calmodulin-binding Proteins AT2G36910 27.586 2.64e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0914 - - gmx:100780238 1579.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0914 8 5756268 5761981 Sto8g2435 8 16668385 16687267 ECH
Sto8g0914 8 5756268 5761981 Sto10g1121 10 10836243 10847162 ECH
Sto8g0914 8 5756268 5761981 Sto8g0914 8 5756268 5761981 ECH