Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0913 ATGCGCAAGAGACATGAGATGGATCCAGAAGAATATTTGTGGAAGTGTTCCAATACGGTTCAGGTGGATGAATCATTTGTTCCGGCTATTCAAGATGAAGTAATGAAAGTTGAGCATTTACTTGTGGAACCTAGAAATGATCTTGTTTCATTAGATGGCGTCTTGTATTTTCATGAGGAGAATCTAGGGAAATGCTATGACAGTGAAAATCTTTCCTCTGGGTTTGAGTTTGGTCTAAAAACAAGTTTTGGTGGATCAGATTCTCATACAACTTTGAATGGAAAAGATGATTTGAAACTTGAGGTTCTTGATGGATTTCTAGATGATGTTGAAATTGATGATCTTAAGGTGACAGATGGATTTTCTGGTGCATGTGAAGATTATCTTTTGGattttgaattttccGACAAAGCTGTGAGTCTTTGTGAAGAATTACCATTACAAAGTTCAAGCTCTGAGAGTCATTCTCCGGGATTAAGTGGAAGTAGCAGTGGTGTTGGTGGGGTTTCCGAATCATCAAAAGTGGCCAATGCACAATCtgaaaacaaaaatgattttctaGATAATAGAGTAATCTGTAACTTCCGTGGTGCCTTTAGGGACAATCCATGTCAAACATCAAATGGCAATTGCATTAGTAATACACTTGATATACAGCATCTAGATAAGTTGGATAATGATCCCCCTCTAGCTGATAGTATATTGTCTCATAAGAGGAAAAAGTGTTTTGTAGAAAAATGTCAAATTGCTGCACCTAGAGAGAAGAGATTTCGCAAGCCAACTCAGAGGTATATTGaagaattttcaaatttaaggtcAAAAGAAAAGATTTTGGCTGCTGCAACCAAACATAAACACTTGAGTGTGATGTCAAATAATGAACATCATCATATGAGGCTTAGAGCATTGAGAAAGATCCCAGGCAAAAATTCTGATAGTGGAACTAGTGATGTGGCACTTCCTGAGTTACAGGTTCACAAGGGACGACTGAAGAATGAGGAAATTGAGTATGATGAAGAACCTATTTCCTCTGAGTCTGAGGATGaatgtgtgacaccaaaaaggtCTATAAAGAATGATCGGAGGAAGCAGCAAAGAATGTGGACTTTATCTGAAGTAATCAAGTTGGTTGATGGCATTTCTGAATATGGAGTTGGTCGATGGACTGATATACAGAGGCTTCTGTTTACGTCTTCCAGTTACCGTACACCAATAGATCTCAGGGACAAGTGGCGGAATCTTTTAAGAGCCAGTTCAGCTCAGAAACTTAACAATGAAGAGACTGAACATAAGCAGGAGCATACGTCACGCCCCTTACCAATTACTGTGCTACGCCGTGTCCGTGAACTGGCTAAAATTTACCCATATCCGAGGGAGCGTTGCTCAAAGGAATCATGCGTTAGCCAAGTTGGCTCTTCTGCCCTTCCAACTAAGAATAAAGGTAGTCTTAGCAAAAGAAATGTAGGTAGGAAGAAGTGTAATATTTGA 1488 0.377 MRKRHEMDPEEYLWKCSNTVQVDESFVPAIQDEVMKVEHLLVEPRNDLVSLDGVLYFHEENLGKCYDSENLSSGFEFGLKTSFGGSDSHTTLNGKDDLKLEVLDGFLDDVEIDDLKVTDGFSGACEDYLLDFEFSDKAVSLCEELPLQSSSSESHSPGLSGSSSGVGGVSESSKVANAQSENKNDFLDNRVICNFRGAFRDNPCQTSNGNCISNTLDIQHLDKLDNDPPLADSILSHKRKKCFVEKCQIAAPREKRFRKPTQRYIEEFSNLRSKEKILAAATKHKHLSVMSNNEHHHMRLRALRKIPGKNSDSGTSDVALPELQVHKGRLKNEEIEYDEEPISSESEDECVTPKRSIKNDRRKQQRMWTLSEVIKLVDGISEYGVGRWTDIQRLLFTSSSYRTPIDLRDKWRNLLRASSAQKLNNEETEHKQEHTSRPLPITVLRRVRELAKIYPYPRERCSKESCVSQVGSSALPTKNKGSLSKRNVGRKKCNI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0913 495 SUPERFAMILY Homeodomain-like 366 425 IPR009057 -
Sto8g0913 495 ProSiteProfiles Myb-like domain profile. 360 415 IPR001005 -
Sto8g0913 495 PANTHER TRF-LIKE 8 13 491 - -
Sto8g0913 495 MobiDBLite consensus disorder prediction 337 358 - -
Sto8g0913 495 MobiDBLite consensus disorder prediction 148 180 - -
Sto8g0913 495 Pfam Myb-like DNA-binding domain 368 415 IPR001005 -
Sto8g0913 495 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 13 491 - -
Sto8g0913 495 SMART sant 364 417 IPR001005 -
Sto8g0913 495 MobiDBLite consensus disorder prediction 472 495 - -
Sto8g0913 495 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 360 419 IPR017930 -
Sto8g0913 495 Gene3D - 354 465 - -
Sto8g0913 495 CDD SANT_TRF 366 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0913 Sto-Chr8 5747498 5751356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0913 364 426 Single Myb Histone (SMH) Gene Family AT1G72740 38.462 3.94e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto8g0913 Myb_DNA-binding 5.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0913 - - aprc:113871152 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0913 8 5747498 5751356 Sto8g0913 8 5747498 5751356 ECH