LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto8g0905	ATGCTTCACTCTGCACTAAGGTTAAGACCTCTAACCTTGTCTCACTTTTCGTGCTACACATGCTTATTCCGCCTTCTTCGTCGCTTTCATGATAATTATCTCACCACCAATTCAATGGCCAAATGTAGCCTTGTGATAAGTCAAAGGCATAAGCAGAGTTCAGATGGCGAAGAACGGCATCGCTTACCCTACCAAATACGCAATATGATCCAACGTAACTGTTTCGTGAAATTCACAGGTTCAAGTAGAGCGCTATGGCTTCTGGCAGATCAAGATCTGTTCCAGGATGATCTTGAGATGGATATATCAACGGCCAGTGTAGAAAGTCCCATGTCAATTGGGAGCTACAAGACAAATAGCAAAGATACGTTTGAGAAAGATGCAAAAGGCATGTTTTTGCAGCGAAAAGAACTTTCCAGGGTGTTTTCTGAGGATTATGATGCCTCGAAGAAGATGATATTCGACCCCAGGGGACCAAGAGTTAACAGATGGAACAAAATGTTCTTAGTAGCATGTTTGATTTCACTGTTTGTTGATCCCCTGTTCTTTTACTTGCCGGAGGCTAAGAAACACAAGTGCATTGCAATATCTGCTACACTCGAAGTCTCCCTCACCACAATTCGGTCCATGGTTGATGCATTTTACATCATTCAGATATTTGTTCGGTTCCAAACTGCTTATGTTGCTCCTTCCTCTCGTGTTTTCGGTAGAGGAGAGCTTGTCATAGACCCTTCAAAGATTGCATCAAGGTACCTCCAGAAACACTTCTGGCTTGATATTGTGGCTGCCCTCCCTCTCCCACAGGTGTTGATTTTGGCTGTTATTCCAAATTTGAGGGGGTCAGAAATGATTGCTTCCAGGCAGATTCTGAGCCTCGTTATCATTTTCCAGGACCTGTTGAGGTTATATCTCATCTTTCCTCTTTCATCTGAAATAGTCAAGGCAAACGGGGTAATGATGGAAAAGGCTTGGGCTGGAGCAGCATATAATTTGATGCTCTATATGCTGGCAAGTCATGTGTTGGGATCATCCTGGTATCTTTTGGGAATTGAAAGGCAAGACGAGTGTTGGAAGAAAGCTTGTAGTCTTGAGTTCCCAAATTGCCGGTATCACTATCTTGATTGTCAAAGCATAAGCAACCCAGCTAGAGTGGCTTGGTTCAGATCAACCAATCTATCAGACCTATGTGATAACAACAGTGATTTCTTTCAGTTCGGTATTTTTGCCGATGCTCTCACTTTGGAAACGACGGAATCAAAGTTCTTAGGGAGATATTATTACTGTCTATGGTGGGGACTACGAAATCTTAGCTCTCTGGGACAGAATCTCCTAACCAGCACTCATGTTACAGAGATAAACTTTGCTGTGATTATTGCAATTCTTGGGTTGGTGCTTTTCGCGCTGCTTATAGGAAATATGCAAACGTACCTGCAATCGACCACAATGCGACTAGAAGAATGGAGAATAAGAAGGACTGATACAGAACGATGGATGCATCACAGGCAGCTACCTGGTTACCTGAAGCAAAACGTGCGACGCTATGAGCAATTCAGATGGGTGGCCACTCGCGGAGTTGACGAGGAAACCATTCTTCGAGACCTTCCTGTGGATATCAGACGCGACATCAAACGCCATCTCTGTCTTAACCTCGTTCGACAAGTAGCGCTATTTGATCAGATGGACGAGAGGATGCTAGACGCAATATGCGAAAGGCTAAAGCCCTCTCTGTGCACTGGAGGGACACGCGTAGTTCGCGAAGGGGATCCAGTGAATGAGATGCTGTTCATCGTCCGAGGGCGGCTTGATTCTTGCACCACCAACGGGGGGCGAACGGGGTTCTTCAATTGCTGCAGAATTGGGGCGGGGGATTTCTGCGGGGAGGAGCTTTTGCCGTGGGCCTTGGACCCACGTCCAAGCGTGGCGCTTCCTTCGTCAACTCGAACAGTAAAAGCGGTGGGAGAAGTGGAAGCATTCGCTCTGATTGCGGAGGATTTGAAATTTGTAGCAGCGCAATTCCGGAGGTTACACAGCAAGCAACTAAGGCACACGTTTAGGTTTCACTCGCACCAATGGAGGACATGGGGTGCGTGCTTCATACAAGCAGCGTGGTTTAGATACAAGAGAAGGAAAGAGTcggtaaagaagaagaagaagccgaAGGAGTTGATATGTACGGATTGGGAGGTGGAATCGAATGCAGCGGAACATTTCTCTGCGCCTTTGCAGGCAGAGAATGTGTGGAGTTTGAGCATGTATGATGCAGCGAAATTGGTAGGCAGCCCCAGGAGAGGTGGAAGCTTGCGATATGCTTCTGAATGTCACATTCTGGGTTCCTTAAGGAAGCCTCTTGAACCTGACTTCACTCTTCACTCTTGA	2376	0.4575	MLHSALRLRPLTLSHFSCYTCLFRLLRRFHDNYLTTNSMAKCSLVISQRHKQSSDGEERHRLPYQIRNMIQRNCFVKFTGSSRALWLLADQDLFQDDLEMDISTASVESPMSIGSYKTNSKDTFEKDAKGMFLQRKELSRVFSEDYDASKKMIFDPRGPRVNRWNKMFLVACLISLFVDPLFFYLPEAKKHKCIAISATLEVSLTTIRSMVDAFYIIQIFVRFQTAYVAPSSRVFGRGELVIDPSKIASRYLQKHFWLDIVAALPLPQVLILAVIPNLRGSEMIASRQILSLVIIFQDLLRLYLIFPLSSEIVKANGVMMEKAWAGAAYNLMLYMLASHVLGSSWYLLGIERQDECWKKACSLEFPNCRYHYLDCQSISNPARVAWFRSTNLSDLCDNNSDFFQFGIFADALTLETTESKFLGRYYYCLWWGLRNLSSLGQNLLTSTHVTEINFAVIIAILGLVLFALLIGNMQTYLQSTTMRLEEWRIRRTDTERWMHHRQLPGYLKQNVRRYEQFRWVATRGVDEETILRDLPVDIRRDIKRHLCLNLVRQVALFDQMDERMLDAICERLKPSLCTGGTRVVREGDPVNEMLFIVRGRLDSCTTNGGRTGFFNCCRIGAGDFCGEELLPWALDPRPSVALPSSTRTVKAVGEVEAFALIAEDLKFVAAQFRRLHSKQLRHTFRFHSHQWRTWGACFIQAAWFRYKRRKESVKKKKKPKELICTDWEVESNAAEHFSAPLQAENVWSLSMYDAAKLVGSPRRGGSLRYASECHILGSLRKPLEPDFTLHS	791

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto8g0905	791	CDD	CAP_ED	556	687	IPR000595	-
	Sto8g0905	791	PANTHER	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	119	788	-	-
	Sto8g0905	791	Gene3D	Jelly Rolls	554	674	IPR014710	-
	Sto8g0905	791	SUPERFAMILY	Voltage-gated potassium channels	155	478	-	-
	Sto8g0905	791	SUPERFAMILY	cAMP-binding domain-like	486	678	IPR018490	-
	Sto8g0905	791	Gene3D	-	167	480	-	-
	Sto8g0905	791	ProSiteProfiles	cAMP/cGMP binding motif profile.	556	639	IPR000595	-
	Sto8g0905	791	Pfam	Ion transport protein	164	483	IPR005821	GO:0005216\|GO:0006811\|GO:0016020\|GO:0055085
	Sto8g0905	791	Gene3D	Helix hairpin bin	483	547	-	-
	Sto8g0905	791	PRINTS	EAG/ELK/ERG potassium channel family signature	219	228	IPR003938	GO:0005249\|GO:0006813\|GO:0016020
	Sto8g0905	791	PRINTS	EAG/ELK/ERG potassium channel family signature	336	346	IPR003938	GO:0005249\|GO:0006813\|GO:0016020
	Sto8g0905	791	PRINTS	EAG/ELK/ERG potassium channel family signature	425	442	IPR003938	GO:0005249\|GO:0006813\|GO:0016020
	Sto8g0905	791	PRINTS	EAG/ELK/ERG potassium channel family signature	451	462	IPR003938	GO:0005249\|GO:0006813\|GO:0016020
	Sto8g0905	791	PRINTS	EAG/ELK/ERG potassium channel family signature	469	478	IPR003938	GO:0005249\|GO:0006813\|GO:0016020
	Sto8g0905	791	PRINTS	EAG/ELK/ERG potassium channel family signature	519	526	IPR003938	GO:0005249\|GO:0006813\|GO:0016020
	Sto8g0905	791	SMART	cnmp_10	556	687	IPR000595	-
	Sto8g0905	791	PANTHER	PROTEIN CNGC15A	119	788	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto8g0905	Sto-Chr8	5693518	5697405	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto8g0905	128	788	Ion Channels	AT2G28260	63.994	0.0	878

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto8g0905	K05391		-	gmx:100815543	1045.42

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto8g0905	8	5693518	5697405	Sto8g0905	8	5693518	5697405	ECH