Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0888 ATGCAAAGCTCTCCTCACTCTCTACTCCTTCTCCCCATTCTGCTGGTCCTCTGTTCCCCCTGCGCATATGGCTTTGGCACCACGGGTCCTATCACTGCTTCATTCGGCAGAGATGAGTTCTTCTGCACCATCGATGCAAGTGGGAAGCAGAACGTCATCTGCTGGGGGATGAACACCTCCTCCTCACTTCCACCCTCTTCTTCTGCTTCATCCTATTTTACTGGCATCCCCGCTATGGCTTCTCTCTCCGGTGGTGAAGGATTTATTTGTGGCATTCTCGCAAACACCTCGCAAGCATACTGCTGGACCGCCTCCAAGCCAGGTACAGATCTCGTGCCTCCCGCATACCAAAACACTGCTTATTCTAATATCGCTGCCGGAAACAACCACGTGTGTGCTATTCGAGGATCCTATTATTCCGATCACGATTCTGGAACGGTGGATTGTTGGGAGATTGTCAGAACTTCCAACAACAGTTTGTCATCGAAACAGAGCGATTTATACTATGATCAATCCACGAGTAGTCTTGAATTGAATCGGGTTGTATCTGGTGAAGGATTTACTTGTGGTGCGCTCAGACAAGGTGGACTTGTTTGTTGGGGTCCTACTTCCTCGAATTTAGGGGTATCCAATGTATCGGACAAATTCATAGCTCTAGCTTCGGGAAGAAATTCGATTTGTGGGATCTCCAACGTTACCGGCGATTTGAAATGCTGGGGCGATGCAGATTCGTACGCTGATCCACCCGTTCAGATTCAGTTGGCTTCTTTGTCAGCTGGGGCGAACCATTTTTGTGGTATTCGAGCGGATAATCATGCGGTCCAGTGCTGGGGGAGTTTTAATCCGTCTTCGGTTCCCAAAGGTTCTGGGTTTGTGGCGATTGCATCTTCAGATTATACAAATTGTGGGATCAGGGAAGTTGATCTTCTTCTTGATTGCTGGTTAGTGAATGCGTCCAAACCTGATTTTGATCCTCCATTGGAATTATCCAGTCCAGGTCTTTGCAGTGCAAGTTCTTGTAGCCAAGGGGAGTTCGCTTTCAATGGGAGTATTCTGAATGAGCCAGATTTAACAAGCCTTTGCGTTAGAAAAGACTTGCAAATCTGTTTGCCATGTGGATCAAATTGTTCTGATGGTTTCTTCTTGTCTAGTCCATGCACCGAGAATGCTGATAGAGTGTGCACCGCTTGTTCTCTTTGCCAGAACAGTTCTTGTTGGGATGTTTGTAAGCTTCAATCACCCGAAGAGATACATAGAAGGCGTTGGCACCATCTGCGTAGATTATTGCTCATAATTGGTTCCGCTGCTTTGTGTTTTTTACTGATATTAACATGCGGCTGTCTTTTTCCATGTTTAATTGCCAAACGAAAAGGACAGGGCACTAAGAAACAACCTAAATCTTGCATAGGAAAAGCAGACCAGGAAGGTGACATGAATGTTGGTCTTCACTCTTCTCCTTCTACGGCTTCGTGTCCCGGTATGCCTCAAGTTTTCCGACTTTCTGAGCTCAAAGATGCCACTAATGGGTTTAAGGAATTCAATGAGCTTGGTAGGGGAGGTTATGGTTTTGTTTACAAAGCTGTATTAGCAGATGGGAGGGTTGTTGCTGTGAAGAGGGCAAATGCGGCTACAATAATTCACACCAACAATCGTGACTTTGAAATGGAATTGGAAATCCTCTGCAAAATTAGGCATTGTAATATAGTGAACTTGTTGGGTTACTGTGCCGAAATGGGAGAGAGGCTGCTTGTTTATGAGTATATGCCTCATGGAACACTTTATGACCACCTTCACGGTGGCCTTTCTCCTCTTAATTGGAGCCTCAGGATTAAGATTTCAATGCAGGTTGCGAAGGGGGTTGAGTACCTTCACAAGGAACTAGTGCCACCCATTGCTCATAAGGATCTCAAGAGTTCAAACATTCTTTTGGATTCAGAGTGGGGAGCAAGAATTGCAGATTTCGGACTTCTTATAACTTCAAGTGATAAAGATCTTAGTGGGGACATGGAAAGCGATGTTTACAACTTTGGGATTGTATTACTAGAGATTCTTAGCGGAAGGAAAGCTTATGACAGAGATTTCACACCTCCAAACATAGTTGAGTGGGCAGTGCCTTTAATCAAACAAGGGAAGGCAGCTGCCATAATTGATCGCTATATAAATCTTCCAAGGAATGTGGAACCTTTGCTTAAGCTTGCTGATATAGCAGGGCTGGCTGTGAGGGAGAATCCAAGATTCAGGAAGCTAGCTGTCCTGGGAGAAACTAGAGCTTTTGCTTTTGCATCAATTCACTTATTGCTCCTAATCTTCACGAAGTGA 2319 0.4515 MQSSPHSLLLLPILLVLCSPCAYGFGTTGPITASFGRDEFFCTIDASGKQNVICWGMNTSSSLPPSSSASSYFTGIPAMASLSGGEGFICGILANTSQAYCWTASKPGTDLVPPAYQNTAYSNIAAGNNHVCAIRGSYYSDHDSGTVDCWEIVRTSNNSLSSKQSDLYYDQSTSSLELNRVVSGEGFTCGALRQGGLVCWGPTSSNLGVSNVSDKFIALASGRNSICGISNVTGDLKCWGDADSYADPPVQIQLASLSAGANHFCGIRADNHAVQCWGSFNPSSVPKGSGFVAIASSDYTNCGIREVDLLLDCWLVNASKPDFDPPLELSSPGLCSASSCSQGEFAFNGSILNEPDLTSLCVRKDLQICLPCGSNCSDGFFLSSPCTENADRVCTACSLCQNSSCWDVCKLQSPEEIHRRRWHHLRRLLLIIGSAALCFLLILTCGCLFPCLIAKRKGQGTKKQPKSCIGKADQEGDMNVGLHSSPSTASCPGMPQVFRLSELKDATNGFKEFNELGRGGYGFVYKAVLADGRVVAVKRANAATIIHTNNRDFEMELEILCKIRHCNIVNLLGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRIKISMQVAKGVEYLHKELVPPIAHKDLKSSNILLDSEWGARIADFGLLITSSDKDLSGDMESDVYNFGIVLLEILSGRKAYDRDFTPPNIVEWAVPLIKQGKAAAIIDRYINLPRNVEPLLKLADIAGLAVRENPRFRKLAVLGETRAFAFASIHLLLLIFTK 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0888 772 SMART serkin_6 510 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0888 772 Pfam Protein kinase domain 510 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0888 772 Gene3D - 175 348 IPR009091 -
Sto8g0888 772 Pfam Regulator of chromosome condensation (RCC1) repeat 255 279 - -
Sto8g0888 772 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Sto8g0888 772 Gene3D - 24 174 IPR009091 -
Sto8g0888 772 SUPERFAMILY Protein kinase-like (PK-like) 485 747 IPR011009 -
Sto8g0888 772 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 339 394 IPR001368 GO:0005515
Sto8g0888 772 PANTHER OS01G0750732 PROTEIN 29 746 - -
Sto8g0888 772 Gene3D Transferase(Phosphotransferase) domain 1 588 752 - -
Sto8g0888 772 Gene3D Phosphorylase Kinase; domain 1 480 587 - -
Sto8g0888 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Sto8g0888 772 ProSiteProfiles Protein kinase domain profile. 510 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0888 772 SUPERFAMILY RCC1/BLIP-II 29 281 IPR009091 -
Sto8g0888 772 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR1 29 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0888 Sto-Chr8 5624275 5626750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0888 8 747 Receptor kinase-like Gene Family AT3G59420 30.655 4.87e-102 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Sto8g0888 Pkinase 3.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0888 - - qsu:112022775 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0888 8 5624275 5626750 Sto8g0888 8 5624275 5626750 ECH