Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto8g0886 ATGAAGATTCCTTGTTCACTTTTTACTTGTTTTTCTGCTGGATCCCTCAAACAAGAAAGCAAGCACGtaGAAGAAGGAGGGAGTGGTGAGGAAAGTAGGTTTCGTGTATTCTCTCACAGCGAATTGAAATCAGCGACTCGTGGGTTTAATTCATCGGAGAAGGTTGGAGAAGGCGGGTTTGGCATTGTGTACAAGGGGCGGCTTCGGGATGGGAATATTGTGGCGGTGAAAGTGCTTTCCATTGAACTGGAATCCATGCGAGGAGAAAGGGAGTTTGTAGCAGAATTGGCTACACTTTCTCAAATCAACCACCAAAATCTCGTTCCCCTTCGTGGTTGTTGTGTAGAAGCAGCTCATAGATATCTAGTCTACGATTACATGCAAAACAACAACCTCCACCACACTTTCCTAGGGGGAGAAGAAAGGAGGATGAGATTCAGATGGGAATTGAGGAGGGACATATCCATAGGAGTGGCTCGTGGCCTTGCCTATCTGCACGACCAACTAAACCCCCACATTGTACACAGAGATATCAAACCCAGCAATATACTTCTTGATCAAAACTTCACACCAAAACTCTCTGACTTTGGCTTCGCAAAATTGTTGAGAGATGAGAAGTCGTATGTCAGTACTAAAGTTGCCGGGACATTGGGGTATCTTGCTCCAGAGTATGCCACTTCAGGACAGTTGACACGAAAATCAGATGTTTATAGCTTTGGAGTATTACTGTTAGAAATTGTGAGCGGCCAAGTAGTGGTGGATGCTTATGAGGATACAGATCGCTTCCTTGTTGAGAAGGTGTGGGCAGCTTATAGAAGTGAAAATCTGATAAGAATGGTGGATCCTGTGCTTAAAACGGCGTTTGAGGAGGAAGAAGCCATACGATTCCTAAGAGTGGGGCTGCTTTGCGTGCAAGAAACAGCCAGGCTTCGACCAAGAATGACAGAGGCAGTGGAAATGTTGAGCAACAAGATTGAGATGGGGGGAATAGAGATATCAAAGCCAGGGTTTGTTGCTGATCTCAGAAACGTCAAAATGAGGCACCAATTGCCTATAATACACGAATCAACCTCAAGCTCAAGTGGAGCACACTATGGAAATTCCTTTTGGAGTTCCGCCAATCTTGGCCGTTAG 1134 0.4524 MKIPCSLFTCFSAGSLKQESKHVEEGGSGEESRFRVFSHSELKSATRGFNSSEKVGEGGFGIVYKGRLRDGNIVAVKVLSIELESMRGEREFVAELATLSQINHQNLVPLRGCCVEAAHRYLVYDYMQNNNLHHTFLGGEERRMRFRWELRRDISIGVARGLAYLHDQLNPHIVHRDIKPSNILLDQNFTPKLSDFGFAKLLRDEKSYVSTKVAGTLGYLAPEYATSGQLTRKSDVYSFGVLLLEIVSGQVVVDAYEDTDRFLVEKVWAAYRSENLIRMVDPVLKTAFEEEEAIRFLRVGLLCVQETARLRPRMTEAVEMLSNKIEMGGIEISKPGFVADLRNVKMRHQLPIIHESTSSSSGAHYGNSFWSSANLGR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto8g0886 377 SUPERFAMILY Protein kinase-like (PK-like) 31 326 IPR011009 -
Sto8g0886 377 Pfam Protein kinase domain 50 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0886 377 CDD STKc_IRAK 55 321 - -
Sto8g0886 377 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 349 - -
Sto8g0886 377 ProSiteProfiles Protein kinase domain profile. 49 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0886 377 Gene3D Phosphorylase Kinase; domain 1 11 126 - -
Sto8g0886 377 PANTHER RECEPTOR-LIKE KINASE 9 349 - -
Sto8g0886 377 SMART serkin_6 49 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto8g0886 377 Gene3D Transferase(Phosphotransferase) domain 1 127 331 - -
Sto8g0886 377 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Sto8g0886 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto8g0886 Sto-Chr8 5617081 5618676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto8g0886 36 340 Receptor kinase-like Gene Family AT1G56120 47.712 8.67e-89 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto8g0886 Pkinase 7.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto8g0886 - - gmx:100813945 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0886 8 5617081 5618676 Sto8g0886 8 5617081 5618676 ECH